RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 TMEM183BQ1AE95 376 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 A0A1W2PRE2 83 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 Q8TCH9 128 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 ATP5G2Q06055 141 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 FAM168AQ92567 244 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 ARPC1AQ92747 370 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
PRKDC-201ENST00000314191 F5H697 171 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 TMEM78Q5T7P6 136 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 YTHDF2Q9Y5A9 579 aaKnown RBP5.03□□□□□ -1.6
PRKDC-201ENST00000314191 PEX7O00628 323 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 LINC01551Q86U37 167 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 CIDEAO60543 219 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 VMO1Q7Z5L0 202 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 PAM16Q9Y3D7 125 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 PLXNA2O75051 1894 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 GGCTO75223 188 aaKnown RBP5.03□□□□□ -1.6
PRKDC-201ENST00000314191 TAS2R60P59551 318 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 TPSG1Q9NRR2 321 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 A0A1B0GW64 132 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 HNRNPA3P51991 378 aaKnown RBP5.03□□□□□ -1.6
PRKDC-201ENST00000314191 PAFAH1B2P68402 229 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 UFC1Q9Y3C8 167 aa5.03□□□□□ -1.6
PRKDC-201ENST00000314191 DIRC3C9JPN6 131 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 OR4B1Q8NGF8 309 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 RNF125Q96EQ8 232 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 Q9H3A6 140 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 AGRNO00468 2067 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 HTN1P15515 57 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 SIGLEC9Q9Y336 463 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 MAS1LP35410 378 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 LOC389332A0A1B0GUA5 103 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 PRSS1P07477 247 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 PSG9Q00887 426 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 EEF1AKMT3Q96AZ1 226 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 TCF20Q9UGU0 1960 aaKnown RBP5.02□□□□□ -1.61
PRKDC-201ENST00000314191 ITGB1BP1O14713 200 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 CA1P00915 261 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-201ENST00000314191 TWIST1Q15672 202 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 IGF2-ASQ6U949 168 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM183AQ8IXX5 376 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 OR2T8A6NH00 312 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 SLX1AQ9BQ83 275 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 SCRT1Q9BWW7 348 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
PRKDC-201ENST00000314191 GFI1BQ5VTD9 330 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 C5orf52A6NGY3 159 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 TGFAP01135 160 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 MGPP08493 103 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 BRD3OSQ6XYD6 125 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 TRGV3P03979 118 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 C11orf42Q8N5U0 333 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 BPESC1Q9GZL8 116 aa5.02□□□□□ -1.61
PRKDC-201ENST00000314191 LRRK1Q38SD2 2015 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 RHOGP84095 191 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TEX36Q5VZQ5 186 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 ZNF600Q6ZNG1 722 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 LINC00479Q96M42 142 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 GPR82Q96P67 336 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 FCER1GP30273 86 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 BMI1P35226 326 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 SPANXN1Q5VSR9 72 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 OR5AN1Q8NGI8 311 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 UTRNP46939 3433 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 SMIM17P0DL12 118 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM170AQ8WVE7 144 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 SELENOKQ9Y6D0 94 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 FOLR2P14207 255 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 PLA2G5P39877 138 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 SSBP4Q9BWG4 385 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-201ENST00000314191 NDUFA4L2Q9NRX3 87 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 F11RQ9Y624 299 aaKnown RBP5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TRBV24-1A0A075B6N3 115 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 WT1-ASQ06250 92 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 OSTCQ9NRP0 149 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM242Q9NWH2 141 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 KIAA1671Q9BY89 1806 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 ADMP35318 185 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TCTAP57738 103 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 PKIAP61925 76 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM219Q86XT9 240 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 C5orf30Q96GV9 206 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.01□□□□□ -1.61
PRKDC-201ENST00000314191 M0QZK8 103 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 RELQ04864 619 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-201ENST00000314191 C22orf34Q6ZV56 151 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 METTL26Q96S19 204 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 GCGP01275 180 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 ZNF833PQ6ZTB9 187 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 TMEM191AQ9H0A3 160 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 LEPROTL1O95214 131 aa5.01□□□□□ -1.61
PRKDC-201ENST00000314191 RPL13AP40429 203 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms