RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SPATA31B1PQ5VZV4 182 aa11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 USP9YO00507 2555 aaPredicted RBP11.53□□□□□ -0.56
SHCBP1-201ENST00000303383 ZNF727A8MUV8 499 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 J3QKU1 62 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 SSBP2P81877 361 aaPredicted RBP11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 PMS2P11Q13670 270 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 RPUSD4Q96CM3 377 aaKnown RBP11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 RNF2Q99496 336 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 DOPEY2Q9Y3R5 2298 aa11.52□□□□□ -0.56
SHCBP1-201ENST00000303383 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 ZNF90Q03938 601 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 FBLN7Q53RD9 439 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 MIR17HGQ75NE6 70 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 Q8N6K4 173 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 TVP23CQ96ET8 276 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 DNAJC4Q9NNZ3 241 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 MAP1AP78559 2803 aaPredicted RBP11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 ABCA2Q9BZC7 2435 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 PAX1P15863 534 aa11.52□□□□□ -0.57
SHCBP1-201ENST00000303383 NAV2Q8IVL1 2488 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 C7orf77A4D0Y5 90 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 GCHFRP30047 84 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 KIAA0141Q14154 515 aaPredicted RBP11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 C10orf113Q5VZT2 155 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 SMIM7Q9BQ49 75 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 DNASE2O00115 360 aaPredicted RBP11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 ORM2P19652 201 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 TMUB1Q9BVT8 246 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 SMCO4Q9NRQ5 59 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 THYN1Q9P016 225 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 KRTAP10-9P60411 292 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 RHEBQ15382 184 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 LINC01356Q8N9X3 169 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 ABCA12Q86UK0 2595 aa11.51□□□□□ -0.57
SHCBP1-201ENST00000303383 CHD6Q8TD26 2715 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 GATA3P23771 443 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 CD81P60033 236 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 Q8N9W7 124 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 OR1B1Q8NGR6 318 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 ECSCRQ19T08 205 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM249Q2WGJ8 235 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 KLF17Q5JT82 389 aaPredicted RBP11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TRGV9Q99603 122 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 MRPL32Q9BYC8 188 aaKnown RBP11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM167BQ9NRX6 74 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 BEX4Q9NWD9 120 aaPredicted RBP11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 A0A0U1RQK1 487 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TGFAP01135 160 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 CRYGCP07315 174 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 C8orf88P0DMB2 117 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 MAPK1IP1LQ8NDC0 245 aa11.5□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 RNF223E7ERA6 249 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 PDE6DO43924 150 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 HLA-DRB1P01911 266 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 FAM90A2PQ658T7 463 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 UNQ5815/PRO19632Q6UWF5 114 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 AJUBAQ96IF1 538 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 SSX3Q99909 188 aa11.49□□□□□ -0.57
SHCBP1-201ENST00000303383 NDPQ00604 133 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 GSX1Q9H4S2 264 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 DMRT1Q9Y5R6 373 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 ELOA3CA0A087WX78 387 aaPredicted RBP11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 IGHV7-81A0A0B4J1V7 117 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 NPIPB5A8MRT5 1133 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 ATP5G3P48201 142 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 PVRIGQ6DKI7 326 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 IGKV1D-37A0A075B6S9 117 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 GNG7O60262 68 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 OR10J4P0C629 311 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 PLA2G2AP14555 144 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 Q5PR19 223 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 OR5AU1Q8NGC0 362 aa11.48□□□□□ -0.57
SHCBP1-201ENST00000303383 CSPG4Q6UVK1 2322 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 I3L2K1 104 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 HYPMO75409 117 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 LYZP61626 148 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 PNRC1Q12796 327 aaPredicted RBP11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 LY6EQ16553 131 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 MOB4Q9Y3A3 225 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 S4R3C0 116 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 F6UZH7 168 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 UBE2L3P68036 154 aaKnown RBP11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 ADIRFQ15847 76 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 Q56UQ5 140 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms