RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 SS18L1O75177 396 aaPredicted RBP11.55□□□□□ -0.56
SDC2-201ENST00000302190 TNFSF13O75888 250 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 Q5PR19 223 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 LCN12Q6JVE5 192 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 Q8NFD4 153 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 GSX1Q9H4S2 264 aaPredicted RBP11.55□□□□□ -0.56
SDC2-201ENST00000302190 SETD2Q9BYW2 2564 aaPredicted RBP11.55□□□□□ -0.56
SDC2-201ENST00000302190 DYSFO75923 2080 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 M0QZ24 198 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 LMO1P25800 156 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
SDC2-201ENST00000302190 PAFAH1B2P68402 229 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 SPRNQ5BIV9 151 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 LINC00305Q7Z4B0 112 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 PRSS3P2Q8NHM4 247 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 TRBV6-6A0A0A6YYG2 114 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 STAG3L2P0CL84 134 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 STAG3L3P0CL85 134 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 PMCHL1Q16048 86 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
SDC2-201ENST00000302190 SRRM5B3KS81 715 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 J3KRW8 73 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 WDR31Q8NA23 367 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 UQCR10Q9UDW1 63 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 RELBQ01201 579 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 TMEM177Q53S58 311 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 Q6ZVH6 145 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 TCF24Q7RTU0 167 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 OR4B1Q8NGF8 309 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 NOTCH2Q04721 2471 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 MMP23AO75900 390 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 NPPCP23582 126 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 ERVK11-1P61568 191 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 UBE2V1Q13404 147 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 LDLRAD2Q5SZI1 272 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 MRPL52Q86TS9 123 aaKnown RBP11.54□□□□□ -0.56
SDC2-201ENST00000302190 C2CD3Q4AC94 2353 aa11.54□□□□□ -0.56
SDC2-201ENST00000302190 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 IGHV3OR16-13A0A075B7E8 117 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 IGHV3-74A0A0B4J1X5 117 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 K7EQM0 130 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 YPEL1O60688 119 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 RPL27AP46776 148 aaKnown RBP11.53□□□□□ -0.56
SDC2-201ENST00000302190 RBPJQ06330 500 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 YPEL2Q96QA6 119 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 OR8B2Q96RD0 313 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 IFI27L2Q9H2X8 130 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 ELOVL5Q9NYP7 299 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 MAP1AP78559 2803 aaPredicted RBP11.53□□□□□ -0.56
SDC2-201ENST00000302190 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 MCRIP2Q9BUT9 160 aaKnown RBP11.53□□□□□ -0.56
SDC2-201ENST00000302190 NRN1Q9NPD7 142 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 J3QW42 95 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 IGLV2-14P01704 120 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 CD40P25942 277 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 ARL3P36405 182 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 UNQ5815/PRO19632Q6UWF5 114 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
SDC2-201ENST00000302190 F2Z2F3 143 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 COA6Q5JTJ3 125 aaKnown RBP11.52□□□□□ -0.56
SDC2-201ENST00000302190 FA2HQ7L5A8 372 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 S100A7AQ86SG5 101 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 ZNF295-AS1Q8N0V1 137 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 STPG4Q8N801 248 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 RASL11BQ9BPW5 248 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 ZNF430Q9H8G1 570 aaPredicted RBP11.52□□□□□ -0.56
SDC2-201ENST00000302190 LAMTOR2Q9Y2Q5 125 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 MYO9AB2RTY4 2548 aa11.52□□□□□ -0.56
SDC2-201ENST00000302190 TMEM238C9JI98 176 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 HYPMO75409 117 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.57
SDC2-201ENST00000302190 GOLT1AQ6ZVE7 132 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 COL5A1P20908 1838 aaPredicted RBP11.52□□□□□ -0.57
SDC2-201ENST00000302190 DPRXA6NFQ7 191 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 BMPR1BO00238 502 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 NUPR1O60356 82 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 FRMD6-AS1P0C7T7 363 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 CDKN1AP38936 164 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 ARF6P62330 175 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 TIMM23BQ5SRD1 257 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 UTF1Q5T230 341 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 C20orf144Q9BQM9 153 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 FBXL15Q9H469 300 aa11.52□□□□□ -0.57
SDC2-201ENST00000302190 CHTOPQ9Y3Y2 248 aaKnown RBP11.52□□□□□ -0.57
SDC2-201ENST00000302190 K7EM74 188 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 OR5AL1P0C617 328 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 OR8A1Q8NGG7 326 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 SVIPQ8NHG7 77 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 IGHV3-23P01764 117 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 FCER1GP30273 86 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 CSN1S1P47710 185 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 Q6ZSR3 168 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 OR4C13Q8NGP0 309 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 PERPQ96FX8 193 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 C5orf30Q96GV9 206 aa11.51□□□□□ -0.57
SDC2-201ENST00000302190 PKD1L2Q7Z442 2459 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms