RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 UPK1BO75841 260 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SCAF4O95104 1147 aaKnown RBP6.85□□□□□ -1.31
HMGN1-201ENST00000288344 IGLC1P0CG04 106 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.315e-59■■■■■ 41.6
HMGN1-201ENST00000288344 TOMM20LQ6UXN7 152 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SBSPONQ8IVN8 264 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SLC24A4Q8NFF2 622 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 C11orf1Q9H5F2 150 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 VSIRQ9H7M9 311 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SMPXQ9UHP9 88 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 SMAD5-AS1Q9Y6J3 95 aa6.85□□□□□ -1.31
HMGN1-201ENST00000288344 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 TRAV25A0A0B4J276 109 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 PIGBOS1A0A0B4J2F0 54 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 ZNF320A2RRD8 509 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 CHEK1O14757 476 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 APOHP02749 345 aaPredicted RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 CD7P09564 240 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 IGHV4-30-4P0DP06 118 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 CD69Q07108 199 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 PLECQ15149 4684 aaKnown RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 LCN12Q6JVE5 192 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 OR52B4Q8NGK2 314 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 DTD1Q8TEA8 209 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 PINX1Q96BK5 328 aaKnown RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 PDCD10Q9BUL8 212 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 C20orf85Q9H1P6 137 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 HEYLQ9NQ87 328 aaPredicted RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 DAZ1Q9NQZ3 744 aaKnown RBP6.84□□□□□ -1.31
HMGN1-201ENST00000288344 PLA2G2DQ9UNK4 145 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 UFC1Q9Y3C8 167 aa6.84□□□□□ -1.31
HMGN1-201ENST00000288344 DNAH1Q9P2D7 4330 aa6.84□□□□□ -1.32
HMGN1-201ENST00000288344 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 IGHV7-4-1A0A0J9YVY3 117 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 CENPXA8MT69 81 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 TSPAN4O14817 238 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 NUPL2O15504 423 aaKnown RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 PAX4O43316 350 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 HOXB5P09067 269 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 NHLRC4P0CG21 123 aaPredicted RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 NPY1RP25929 384 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 GPX4P36969 197 aaPredicted RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 NPBWR1P48145 328 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 HOXA1P49639 335 aaPredicted RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 YPEL3P61236 119 aaPredicted RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 DCTN2Q13561 401 aaKnown RBP6.83□□□□□ -1.32
HMGN1-201ENST00000288344 GAMTQ14353 236 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 ZNF846Q147U1 533 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 Q56UQ5 140 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 PALMDQ9NP74 551 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 SELENOKQ9Y6D0 94 aa6.83□□□□□ -1.32
HMGN1-201ENST00000288344 IGHV3OR16-8A0A075B7F1 116 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RBMY1BA6NDE4 496 aaKnown RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RBMY1EA6NEQ0 496 aaKnown RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 CEBPZOSA8MTT3 80 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 SYNGR2O43760 224 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 GNG7O60262 68 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 IL5P05113 134 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RBMY1DP0C7P1 496 aaKnown RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 SLC25A4P12235 298 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 CRYBB3P26998 211 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RELQ04864 619 aaPredicted RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 BTNL8Q6UX41 500 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 ZNF600Q6ZNG1 722 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 STPG3Q8N7X2 389 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 UBAC2Q8NBM4 344 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RNASE11Q8TAA1 199 aaKnown RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 NPIPB3Q92617 1050 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RNF2Q99496 336 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 WDR12Q9GZL7 423 aaKnown RBP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 PUS1Q9Y606 427 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGN1-201ENST00000288344 RYR3Q15413 4870 aa6.82□□□□□ -1.32
HMGN1-201ENST00000288344 TRAV30A0A087WSZ9 112 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 TRAV14DV4A0A0A6YYC5 116 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 ZNF207O43670 478 aaKnown RBP6.81□□□□□ -1.32
HMGN1-201ENST00000288344 OPRK1P41145 380 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 INPP1P49441 399 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 RND2P52198 227 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 TIGITQ495A1 244 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 TMEM14EPQ6UXP3 125 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 NRARPQ7Z6K4 114 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 NOXA1Q86UR1 476 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 OR1S1Q8NH92 325 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 ZNF431Q8TF32 576 aaPredicted RBP6.81□□□□□ -1.32
HMGN1-201ENST00000288344 SMIM8Q96KF7 97 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 SPAG8Q99932 426 aaPredicted RBP6.81□□□□□ -1.32
HMGN1-201ENST00000288344 FAM110AQ9BQ89 295 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 NEURL2Q9BR09 285 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 SEC22CQ9BRL7 303 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 MARVELD1Q9BSK0 173 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 RHPN1-AS1Q9BWJ2 59 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 MAGT1Q9H0U3 335 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 ENY2Q9NPA8 101 aa6.81□□□□□ -1.32
HMGN1-201ENST00000288344 NUDT15Q9NV35 164 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms