RNA–Protein interactions for RNA: ENST00000283351.8

TRAPPC8-201, Transcript of trafficking protein particle complex 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC8, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-201ENST00000283351 CXCL2P19875 107 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 ZNF474Q6S9Z5 364 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 RPP21Q9H633 154 aaKnown RBP12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 PPP1R3EQ9H7J1 279 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 LINC00158P58513 81 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 DOCK10Q96BY6 2186 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 PYYP10082 97 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 NOTCH3Q9UM47 2321 aa12.19□□□□□ -0.46
TRAPPC8-201ENST00000283351 M0R1W7 72 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 SRRM5B3KS81 715 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 RPL36AP83881 106 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 PRCDQ00LT1 54 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 STPG2Q8N412 459 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 RPL36ALQ969Q0 106 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 JPT2Q9H910 190 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 SRRM4A7MD48 611 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 TMEM144Q7Z5S9 345 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 MBNL3Q9NUK0 354 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 INSP01308 110 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 CRYGSP22914 178 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 CBLN1P23435 193 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 CD300CQ08708 224 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 C1orf122Q6ZSJ8 110 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 FLVCR1-AS1Q8TAF5 88 aa12.18□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGLV3-32A0A0A0MS00 114 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 TCF15Q12870 199 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 HEPN1Q6WQI6 88 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 DOCK7Q96N67 2140 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 TRBV6-7A0A0A0MS04 114 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 A0A1B0GTI1 187 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 CD5P06127 495 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 DAD1P61803 113 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 LYPD2Q6UXB3 125 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 OOSP1A8MZH6 123 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 OVOL3O00110 214 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 GATA3P23771 443 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 UCP1P25874 307 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 RCC1LQ96I51 464 aaKnown RBP12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 RALGAPA1Q6GYQ0 2036 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 FAM131CQ96AQ9 280 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 LYZL4Q96KX0 146 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 PEF1Q9UBV8 284 aaKnown RBP12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 SLC25A34Q6PIV7 304 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 TMEM86BQ8N661 226 aa12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC8-201ENST00000283351 ATP5G3P48201 142 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 ARFGEF3Q5TH69 2177 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGKV1D-13A0A0B4J2D9 117 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 GAGE10A6NGK3 116 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGKV1-13P0DP09 117 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 OR1P1Q8NH06 330 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 DEFB131AP59861 70 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 CFHR3Q02985 330 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 PMCHL1Q16048 86 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 FOCADQ5VW36 1801 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 TSPAN13O95857 204 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 RPRMLQ8N4K4 120 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 MRPL16Q9NX20 251 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 APOMO95445 188 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 ZNF660Q6AZW8 331 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 ORMDL3Q8N138 153 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 NABP1Q96AH0 204 aa12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-201ENST00000283351 CACNA1HO95180 2353 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 NBL1P41271 181 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 LCN12Q6JVE5 192 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 PSG8Q9UQ74 426 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGKV2-40A0A087WW87 121 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 HOXA3O43365 443 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 IGKV2D-40P01614 121 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 DUTP33316 252 aaKnown RBP12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 RHPN1-AS1Q9BWJ2 59 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 GHRHP01286 108 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 NR2C2APQ86WQ0 139 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 USMG5Q96IX5 58 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 SNAI2O43623 268 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 LHBP01229 141 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 EVI2AP22794 236 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 SPSB3Q6PJ21 355 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
TRAPPC8-201ENST00000283351 LDLRAD4O15165 306 aa12.15□□□□□ -0.47
TRAPPC8-201ENST00000283351 TNFSF13O75888 250 aa12.15□□□□□ -0.47
TRAPPC8-201ENST00000283351 REG4Q9BYZ8 158 aa12.15□□□□□ -0.47
TRAPPC8-201ENST00000283351 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 ZNF250P15622 560 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 DTX1Q86Y01 620 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 ZFC3H1O60293 1989 aaKnown RBP12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 CACNA1DQ01668 2161 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 TRBV7-1A0A0A6YYK4 115 aa12.14□□□□□ -0.47
TRAPPC8-201ENST00000283351 SOD3P08294 240 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms