RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 CEP290O15078 2479 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 NPIPB5A8MRT5 1133 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 ZNF600Q6ZNG1 722 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 EPDR1Q9UM22 224 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 CD28P10747 220 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 IFI27P40305 119 aaPredicted RBP9.83□□□□□ -0.84
SHPRH-201ENST00000275233 TP53BP1Q12888 1972 aaPredicted RBP9.83□□□□□ -0.84
SHPRH-201ENST00000275233 TRAV21A0A0B4J279 112 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 PVRIGQ6DKI7 326 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 FAM89BQ8N5H3 189 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 NEUROG1Q92886 237 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 PSG8Q9UQ74 426 aa9.83□□□□□ -0.84
SHPRH-201ENST00000275233 C15orf32Q32M92 178 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 CYB5R2Q6BCY4 276 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 NR2C2APQ86WQ0 139 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 ADARB2-AS1A8MUL3 147 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 H3BUX3 64 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 LINC00614P0C842 121 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 DUTP33316 252 aaKnown RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 KLF17Q5JT82 389 aaPredicted RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 COQ2Q96H96 371 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 ZNF257Q9Y2Q1 563 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 ANK1P16157 1881 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 EFNA2O43921 213 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 SRSF3P84103 164 aaKnown RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 SEPSECSQ9HD40 501 aaKnown RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 TRAV2A0A0B4J234 112 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 DUSP14O95147 198 aaKnown RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 RPL23P62829 140 aaKnown RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 IGFL4Q6B9Z1 124 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 ASCL2Q99929 193 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 TRPM7Q96QT4 1865 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 LOC285556D6RIA3 1793 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 FAM166AQ6J272 317 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 ASCL4Q6XD76 172 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 Q71RC1 249 aaPredicted RBP9.82□□□□□ -0.84
SHPRH-201ENST00000275233 DOCK6Q96HP0 2047 aa9.82□□□□□ -0.84
SHPRH-201ENST00000275233 RNF222A6NCQ9 220 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 A0A1B0GV90 55 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 LILRA1O75019 489 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 ACTL10Q5JWF8 245 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 SAMD13Q5VXD3 122 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 EXOC3-AS1Q8N2X6 119 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 SDK2Q58EX2 2172 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 ALPK2Q86TB3 2170 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 EFNA4P52798 201 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 LCNL1Q6ZST4 164 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 RNF126Q9BV68 326 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 IGKV1-12A0A0C4DH73 117 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 LYPD3O95274 346 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 IGKV1D-12P01611 117 aa9.81□□□□□ -0.84
SHPRH-201ENST00000275233 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 PMS2P5A8MQ11 134 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 KLHDC3Q9BQ90 382 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 SCRT1Q9BWW7 348 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 MBNL3Q9NUK0 354 aaKnown RBP9.8□□□□□ -0.84
SHPRH-201ENST00000275233 TMEM178BH3BS89 294 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 LINC00271P0C7V0 271 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 EFNB3Q15768 340 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 CD177Q8N6Q3 437 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 IGHV1-3A0A0C4DH29 117 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 IGHV1-8P0DP01 117 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 PRCDQ00LT1 54 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 NXT2Q9NPJ8 142 aaKnown RBP9.8□□□□□ -0.84
SHPRH-201ENST00000275233 TIMP3P35625 211 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 LINC00205P59089 165 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 SPATA31B1PQ5VZV4 182 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 RCHY1Q96PM5 261 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 WFDC1Q9HC57 220 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 SLC25A20O43772 301 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 PLSCR4Q9NRQ2 329 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 AHCTF1Q8WYP5 2266 aa9.8□□□□□ -0.84
SHPRH-201ENST00000275233 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 COL8A2P25067 703 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 PRR30Q53SZ7 412 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-201ENST00000275233 TPTE2P1Q5T6R2 138 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 SERF1AO75920 110 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 C5orf63A6NC05 138 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 FAM169BQ8N8A8 192 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 ZNF474Q6S9Z5 364 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-201ENST00000275233 CRIM1Q9NZV1 1036 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 IGKV1-27A0A075B6S5 117 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 IGLV3-32A0A0A0MS00 114 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 TRGV1A0A0A0MS02 117 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 FCN3O75636 299 aa9.79□□□□□ -0.84
SHPRH-201ENST00000275233 TRGV11A0A075B6L2 103 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 F8VVB4 439 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 F8VWA3 439 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 TDGF1P3P51864 188 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 LINC00158P58513 81 aa9.78□□□□□ -0.84
SHPRH-201ENST00000275233 SRSF1Q07955 248 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms