RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 GPR82Q96P67 336 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
NPC1-201ENST00000269228 NPIPB6E9PJ23 425 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 NSUN5P1Q3KNT7 163 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 IGF2-ASQ6U949 168 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 CEACAM4O75871 244 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 C5orf64Q2M2E5 130 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 KIR3DL3Q8N743 410 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 SNCGO76070 127 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 TRGC1P0CF51 173 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 PYYP10082 97 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 SAA4P35542 130 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 C15orf32Q32M92 178 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 SLX1AQ9BQ83 275 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 PRTN3P24158 256 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 RSPO1Q2MKA7 263 aaPredicted RBP11.24□□□□□ -0.61
NPC1-201ENST00000269228 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 WDR83OSQ9Y284 106 aa11.24□□□□□ -0.61
NPC1-201ENST00000269228 SCGB1C2P0DMR2 95 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 HERPUD1Q15011 391 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 Q5PR19 223 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 PSMB11A5LHX3 300 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 M0R381 172 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 NDUFS8O00217 210 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 IGLV1-44P01699 117 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 PAX8Q06710 450 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 ZNRD1Q9P1U0 126 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 PAM16Q9Y3D7 125 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MALRD1Q5VYJ5 2156 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 IGFL2Q6UWQ7 119 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 RNF5Q99942 180 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 MBNL3Q9NUK0 354 aaKnown RBP11.23□□□□□ -0.61
NPC1-201ENST00000269228 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 PLXNB3Q9ULL4 1909 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 DDTP30046 118 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
NPC1-201ENST00000269228 UBE2L6O14933 153 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 SRP19P09132 144 aaKnown RBP11.22□□□□□ -0.61
NPC1-201ENST00000269228 TCTAP57738 103 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 NMSQ5H8A3 153 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 LHFPL4Q7Z7J7 247 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 SPOCK3Q9BQ16 436 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 SLC17A3O00476 420 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 VENTXO95231 258 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 GATA4P43694 442 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 GNG5P63218 68 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 WDR86Q86TI4 376 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 DUX3Q96PT4 197 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 MAP1LC3AQ9H492 121 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 MSMBP08118 114 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 GRNP28799 593 aaKnown RBP11.22□□□□□ -0.61
NPC1-201ENST00000269228 SRIP30626 198 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 SMAGPQ0VAQ4 97 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 TREML4Q6UXN2 200 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 TBX15Q96SF7 602 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 ZNF585BQ52M93 769 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 DUX4L9Q6RFH8 374 aaPredicted RBP11.22□□□□□ -0.61
NPC1-201ENST00000269228 Q6ZS49 121 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 GSN-AS1Q9NRJ2 163 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 CDC42EP3Q9UKI2 254 aa11.22□□□□□ -0.61
NPC1-201ENST00000269228 TBL2Q9Y4P3 447 aaKnown RBP11.22□□□□□ -0.61
NPC1-201ENST00000269228 SRD5A1P18405 259 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 AP5S1Q9NUS5 200 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 SIGLEC9Q9Y336 463 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 DKK1O94907 266 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 RNASE4P34096 147 aaKnown RBP11.21□□□□□ -0.61
NPC1-201ENST00000269228 EFNB3Q15768 340 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 Q8TCH9 128 aa11.21□□□□□ -0.61
NPC1-201ENST00000269228 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 ZNF329Q86UD4 541 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 NUDT3O95989 172 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 IGKV1-16P04430 117 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 ASIPP42127 132 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 DLX1P56177 255 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 TCF24Q7RTU0 167 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 KLK15Q9H2R5 256 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 OTORQ9NRC9 128 aa11.21□□□□□ -0.62
NPC1-201ENST00000269228 ATRAIDQ6UW56 229 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 MED13Q9UHV7 2174 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 LINC01587Q99440 93 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 HSPB9Q9BQS6 159 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 IGKV1-6A0A0C4DH72 117 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 DIRC3C9JPN6 131 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 PRB1P04280 392 aa11.2□□□□□ -0.62
NPC1-201ENST00000269228 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
NPC1-201ENST00000269228 ZNF502Q8TBZ5 544 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms