RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 UCP1P25874 307 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 PEF1Q9UBV8 284 aaKnown RBP12.31□□□□□ -0.44
CCDC6-201ENST00000263102 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GAGE1Q13065 139 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GAGE4Q13068 117 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GAGE5Q13069 117 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GAGE13Q4V321 117 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 GGACTQ9BVM4 153 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 SNHG12Q9BXW3 62 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 RP1L1Q8IWN7 2480 aaPredicted RBP12.31□□□□□ -0.44
CCDC6-201ENST00000263102 A0A087WWL8 130 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 A0A1B0GW15 77 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 PAX9P55771 341 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 PRR30Q53SZ7 412 aaPredicted RBP12.31□□□□□ -0.44
CCDC6-201ENST00000263102 TMEM256Q8N2U0 113 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 ZNFX1Q9P2E3 1918 aaKnown RBP12.3□□□□□ -0.44
CCDC6-201ENST00000263102 LINC01619G3V211 115 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 SELLP14151 372 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 COL8A2P25067 703 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 TRAV5A0A0B4J249 113 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 KNCNA6PVL3 124 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 ORMDL2Q53FV1 153 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 DPM2O94777 84 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 UBE2BP63146 152 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 ATXN8Q156A1 80 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 C10orf55Q5SWW7 151 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
CCDC6-201ENST00000263102 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
CCDC6-201ENST00000263102 LRP5O75197 1615 aa12.3□□□□□ -0.44
CCDC6-201ENST00000263102 NCR2O95944 276 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 IGLV3-21P80748 117 aaPredicted RBP12.29□□□□□ -0.44
CCDC6-201ENST00000263102 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 YPEL1O60688 119 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 APOC4P55056 127 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 EPDR1Q9UM22 224 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 IGHV1-8P0DP01 117 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 TMEM14DPA8MWL7 114 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 ITGB1BP1O14713 200 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 MRPL14Q6P1L8 145 aaKnown RBP12.29□□□□□ -0.44
CCDC6-201ENST00000263102 TMEM144Q7Z5S9 345 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
CCDC6-201ENST00000263102 TMEM155Q4W5P6 130 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 MRPS18AQ9NVS2 196 aaKnown RBP12.29□□□□□ -0.44
CCDC6-201ENST00000263102 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
CCDC6-201ENST00000263102 TNFSF13O75888 250 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 APC2O95996 2303 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 PQLC2LA1A4F0 135 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 GZMMP51124 257 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 DANCRP0C864 163 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 FOXL1Q12952 345 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 TRAV25A0A0B4J276 109 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 OVOL3O00110 214 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 PIN1P1O15428 100 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 IGKCP01834 107 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 RHPN1-AS1Q9BWJ2 59 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 TRBV7-1A0A0A6YYK4 115 aa12.28□□□□□ -0.44
CCDC6-201ENST00000263102 H3BUT2 72 aa12.27□□□□□ -0.44
CCDC6-201ENST00000263102 MSMBP08118 114 aa12.27□□□□□ -0.44
CCDC6-201ENST00000263102 TIMP3P35625 211 aa12.27□□□□□ -0.44
CCDC6-201ENST00000263102 PMS2P5A8MQ11 134 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 CD5P06127 495 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 CTHRC1Q96CG8 243 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE7O76087 117 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 EXOC3-AS1Q8N2X6 119 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 F5P12259 2224 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 COL22A1Q8NFW1 1626 aaPredicted RBP12.27□□□□□ -0.45
CCDC6-201ENST00000263102 TMEM178BH3BS89 294 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 SAA4P35542 130 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 RMI2Q96E14 147 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 SCRT1Q9BWW7 348 aa12.27□□□□□ -0.45
CCDC6-201ENST00000263102 MCRIP2Q9BUT9 160 aaKnown RBP12.26□□□□□ -0.45
CCDC6-201ENST00000263102 IGLV2-23P01705 113 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 TCRAP04437 139 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 CD55P08174 381 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 LEPROTO15243 131 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 MINOS1Q5TGZ0 78 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 MDS2Q8NDY4 140 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 WBP1Q96G27 269 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 KLF12Q9Y4X4 402 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 MINOS1-NBL1R4GNA1 71 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 SCN1AP35498 2009 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 LGALS1P09382 135 aaKnown RBP12.26□□□□□ -0.45
CCDC6-201ENST00000263102 LAGE3Q14657 143 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 PRDM13Q9H4Q3 707 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 IGKV1OR2-108A0A075B7D4 117 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 CLPSL2Q6UWE3 100 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 Q8TAT8 98 aa12.26□□□□□ -0.45
CCDC6-201ENST00000263102 MDC1Q14676 2089 aaKnown RBP12.25□□□□□ -0.45
CCDC6-201ENST00000263102 GREM1O60565 184 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms