RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 C17orf58Q2M2W7 97 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 SLC35E1Q96K37 410 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 A0A1W2PS18 150 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 VSTM5A8MXK1 200 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 NDUFS8O00217 210 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 ISLRO14498 428 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 CTRLP40313 264 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 PLEKHA3Q9HB20 300 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 MYO18BQ8IUG5 2567 aa13.77□□□□□ -0.2
FOXA1-201ENST00000250448 ZNF253O75346 499 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 IGLV2-8P01709 118 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 PRB1P04280 392 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 CGB3P0DN86 165 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 CGB7P0DN87 165 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 SPATA45Q537H7 98 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 MOB3BQ86TA1 216 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 C17orf100A8MU93 164 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 BMPR1BO00238 502 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 HLA-DQA1P01909 254 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 SRIP30626 198 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 POU2AF1Q16633 256 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 MRPL54Q6P161 138 aaKnown RBP13.77□□□□□ -0.21
FOXA1-201ENST00000250448 LHFPL4Q7Z7J7 247 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 PRNDQ9UKY0 176 aa13.77□□□□□ -0.21
FOXA1-201ENST00000250448 TAS2R45P59539 299 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
FOXA1-201ENST00000250448 IBA57Q5T440 356 aaKnown RBP13.76□□□□□ -0.21
FOXA1-201ENST00000250448 ADTRPQ96IZ2 230 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 IGF2BP2-AS1Q96M15 143 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 IGKV1OR2-108A0A075B7D4 117 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 J3QR06 171 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 ZNF324O75467 553 aaPredicted RBP13.76□□□□□ -0.21
FOXA1-201ENST00000250448 MGST1P10620 155 aaKnown RBP13.76□□□□□ -0.21
FOXA1-201ENST00000250448 GATA2P23769 480 aaPredicted RBP13.76□□□□□ -0.21
FOXA1-201ENST00000250448 CFHR2P36980 270 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 PRCDQ00LT1 54 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 COL5A1-AS1Q5SY13 56 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 LYG1Q8N1E2 194 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 CDC42EP3Q9UKI2 254 aa13.76□□□□□ -0.21
FOXA1-201ENST00000250448 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 TNFSF4P23510 183 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 PPOXP50336 477 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 RAB9BQ9NP90 201 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 DYNLRB1Q9NP97 96 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 RAI1Q7Z5J4 1906 aaPredicted RBP13.75□□□□□ -0.21
FOXA1-201ENST00000250448 MMP23AO75900 390 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 LHBP01229 141 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 RTL8BQ17RB0 113 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 RNF7Q9UBF6 113 aa13.75□□□□□ -0.21
FOXA1-201ENST00000250448 UTP20O75691 2785 aaKnown RBP13.74□□□□□ -0.21
FOXA1-201ENST00000250448 A0A1W2PRE2 83 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 SERTAD4Q9NUC0 356 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 ZNF257Q9Y2Q1 563 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 ZNF462Q96JM2 2506 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 DSCAML1Q8TD84 2053 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 KBTBD11-OT1A0A1B0GTJ5 212 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 UPK2O00526 184 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 TFPI2P48307 235 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 ODF1Q14990 250 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 SMIM15Q7Z3B0 74 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 NIT1Q86X76 327 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 PNKDQ8N490 385 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 C19orf24Q9BVV8 132 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 GSX1Q9H4S2 264 aaPredicted RBP13.74□□□□□ -0.21
FOXA1-201ENST00000250448 CLEC5AQ9NY25 188 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 UQCR10Q9UDW1 63 aa13.74□□□□□ -0.21
FOXA1-201ENST00000250448 USP9XQ93008 2570 aaPredicted RBP13.74□□□□□ -0.21
FOXA1-201ENST00000250448 GATA4P43694 442 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 CCL17Q92583 94 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 SAP30LQ9HAJ7 183 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 TANC2Q9HCD6 1990 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 IZUMO1RA6ND01 250 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 REG1AP05451 166 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 C3orf79P0CE67 100 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 C8orf88P0DMB2 117 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 ZNF439Q8NDP4 499 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 A0A1W2PN81 502 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 APCSP02743 223 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 C2orf83Q53S99 150 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 OR9G1Q8NH87 305 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 CCL13Q99616 98 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 SLC35D1Q9NTN3 355 aa13.73□□□□□ -0.21
FOXA1-201ENST00000250448 TACC2O95359 2948 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 USF1P22415 310 aaPredicted RBP13.72□□□□□ -0.21
FOXA1-201ENST00000250448 PRRX1P54821 245 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 SSX8Q7RTT4 187 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 TSKUQ8WUA8 353 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 COMMD5Q9GZQ3 224 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 LYNX1G3V0Z9 82 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 IGLC2P0DOY2 106 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 IGLC3P0DOY3 106 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 LYNX1P0DP58 116 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 APOBEC3AP31941 199 aaPredicted RBP13.72□□□□□ -0.21
FOXA1-201ENST00000250448 MMDQ15546 238 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 FAM216BQ8N7L0 139 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 ITLN2Q8WWU7 325 aaPredicted RBP13.72□□□□□ -0.21
FOXA1-201ENST00000250448 NUDT11Q96G61 164 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
FOXA1-201ENST00000250448 ASH1LQ9NR48 2969 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms