RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 OSTCQ9NRP0 149 aa15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 TNFRSF19Q9NS68 423 aa15.64■□□□□ 0.09
CDC42EP1-201ENST00000249014 TPRP12270 2363 aaKnown RBP15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 CCL21O00585 134 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 IER3P46695 156 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 COMPP49747 757 aaPredicted RBP15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 LHFPL4Q7Z7J7 247 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 NHLRC2Q8NBF2 726 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 TP53TG3Q9ULZ0 132 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 MSRB2Q9Y3D2 182 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 ABCA4P78363 2273 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 IGHV3-21A0A0B4J1V1 117 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 MGST1P10620 155 aaKnown RBP15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 ZNF329Q86UD4 541 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 MRPL41Q8IXM3 137 aaKnown RBP15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 BEND2Q8NDZ0 799 aa15.63■□□□□ 0.09
CDC42EP1-201ENST00000249014 ISLRO14498 428 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 LY6HO94772 140 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 ORM2P19652 201 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 ASPHD1Q5U4P2 390 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 ETFRF1Q6IPR1 90 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 ST6GALNAC3Q8NDV1 305 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 CDC42EP3Q9UKI2 254 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 AMMECR1Q9Y4X0 333 aaPredicted RBP15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 SPINK4O60575 86 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 UNQ6494/PRO21346Q6UXR6 183 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 PPP1R27Q86WC6 154 aa15.62■□□□□ 0.09
CDC42EP1-201ENST00000249014 SPTA1P02549 2419 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 SNURFLB1AK76 121 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 TEX22C9J3V5 150 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 FCN1O00602 326 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 IBA57Q5T440 356 aaKnown RBP15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 OR1B1Q8NGR6 318 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 IGF2RP11717 2491 aa15.61■□□□□ 0.09
CDC42EP1-201ENST00000249014 ZNF705GA8MUZ8 300 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TSTD3H0UI37 97 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 LINC00310P59036 64 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 SLC35B1P78383 322 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 CX3CL1P78423 397 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 DEFA6Q01524 100 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 LDLRAD2Q5SZI1 272 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TMEM116Q8NCL8 245 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 C8orf46Q8TAG6 207 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 RPEQ96AT9 228 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TRGV9Q99603 122 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 FBXL15Q9H469 300 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 RAXQ9Y2V3 346 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 ARHGAP32A7KAX9 2087 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 DDTP30046 118 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TCL1AP56279 114 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TAS2R60P59551 318 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 ZNF664Q8N3J9 261 aa15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 GSX1Q9H4S2 264 aaPredicted RBP15.6■□□□□ 0.09
CDC42EP1-201ENST00000249014 TRAV34A0A0B4J273 112 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 LY6LH3BQJ8 138 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 RBP4P02753 201 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 MYCNOSP40205 109 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 ADORA2A-AS1P86434 159 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 C14orf144Q96I85 54 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 HRNRQ86YZ3 2850 aaPredicted RBP15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 PEX7O00628 323 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 PAX1P15863 534 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 OR8B3Q8NGG8 313 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 OR8B2Q96RD0 313 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 GNB1LQ9BYB4 327 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 ONECUT1Q9UBC0 465 aa15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 F11RQ9Y624 299 aaKnown RBP15.59■□□□□ 0.09
CDC42EP1-201ENST00000249014 SMIM27A0A1W2PRY6 76 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 CA1P00915 261 aaPredicted RBP15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 CRISP2P16562 243 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 RANP62826 216 aaKnown RBP15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 GNG5P63218 68 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 FAM168AQ92567 244 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 PERPQ96FX8 193 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 SERTAD4Q9NUC0 356 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 F2Z2F3 143 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 CMTM2Q8TAZ6 248 aa15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 ZMAT5Q9UDW3 170 aaKnown RBP15.58■□□□□ 0.08
CDC42EP1-201ENST00000249014 TRBV9A0A0B4J1U6 114 aa15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 GATCO43716 136 aaKnown RBP15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 LY6G5BQ8NDX9 201 aa15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 BLNKQ8WV28 456 aa15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 SRSF12Q8WXF0 261 aaKnown RBP15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 C22orf15Q8WYQ4 148 aa15.57■□□□□ 0.08
CDC42EP1-201ENST00000249014 SSX2Q16385 188 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 TMEM136Q6ZRR5 245 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 ABCA1O95477 2261 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 NBASA2RRP1 2371 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 CORTO00230 105 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 SERF1AO75920 110 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 LIPFP07098 398 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 PAX2Q02962 417 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 BAGE2Q86Y30 109 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 SSBP3Q9BWW4 388 aaPredicted RBP15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 NAT8BQ9UHF3 227 aa15.56■□□□□ 0.08
CDC42EP1-201ENST00000249014 TIMM23O14925 209 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 RAB4BP61018 213 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 KLRB1Q12918 225 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 LEMD1Q68G75 181 aa15.55■□□□□ 0.08
CDC42EP1-201ENST00000249014 STXBP6Q8NFX7 210 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms