RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 FABP5P3A8MUU1 101 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 APOHP02749 345 aaPredicted RBP10.59□□□□□ -0.71
MSH2-201ENST00000233146 TEX29Q8N6K0 151 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 WDR31Q8NA23 367 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 PPIFP30405 207 aaKnown RBP10.59□□□□□ -0.71
MSH2-201ENST00000233146 LTBRP36941 435 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.59□□□□□ -0.71
MSH2-201ENST00000233146 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 FGFBP3Q8TAT2 258 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.59□□□□□ -0.71
MSH2-201ENST00000233146 SPEGQ15772 3267 aa10.59□□□□□ -0.71
MSH2-201ENST00000233146 ZNF137PP52743 207 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 GLMPQ8WWB7 406 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 VPREB3Q9UKI3 123 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 SEC16AO15027 2179 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 A0A096LNJ9 63 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 GFRA3O60609 400 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 CT45A10P0DMU9 189 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 ATP5J2P56134 94 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 CEND1Q8N111 149 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 ZNF32P17041 273 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 ZNF808Q8N4W9 903 aaPredicted RBP10.58□□□□□ -0.72
MSH2-201ENST00000233146 SMRP1Q8NCR6 262 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 PIFOQ8TCI5 191 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
MSH2-201ENST00000233146 LTAP01374 205 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 PATE4P0C8F1 98 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 CACNG7P62955 275 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 DIAPH2-AS1Q14236 149 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 HSD17B10Q99714 261 aaKnown RBP10.57□□□□□ -0.72
MSH2-201ENST00000233146 PKIBQ9C010 78 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 ABCA7Q8IZY2 2146 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 B4GALT1P15291 398 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 SRD5A1P18405 259 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 SMCPP49901 116 aaPredicted RBP10.57□□□□□ -0.72
MSH2-201ENST00000233146 GNG3P63215 75 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 MOGAT3Q86VF5 341 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 RNF138Q8WVD3 245 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 ZNF488Q96MN9 340 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 C12orf49Q9H741 205 aa10.57□□□□□ -0.72
MSH2-201ENST00000233146 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
MSH2-201ENST00000233146 B9A039 149 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 CHEK1O14757 476 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 DSCR4P56555 118 aaPredicted RBP10.56□□□□□ -0.72
MSH2-201ENST00000233146 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 RPRMLQ8N4K4 120 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 PRSS22Q9GZN4 317 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 REV3LO60673 3130 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 NPIPB5A8MRT5 1133 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 PRTN3P24158 256 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
MSH2-201ENST00000233146 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 CT83Q5H943 113 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 SPTBN5Q9NRC6 3674 aaKnown RBP10.56□□□□□ -0.72
MSH2-201ENST00000233146 EML6Q6ZMW3 1958 aa10.56□□□□□ -0.72
MSH2-201ENST00000233146 RHODO00212 210 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 PRRG2O14669 202 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 IGHG4P01861 327 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 PF4V1P10720 104 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 SRSF1Q07955 248 aaKnown RBP eCLIP10.55□□□□□ -0.72
MSH2-201ENST00000233146 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 BRWD1Q9NSI6 2320 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 IGLV3-32A0A0A0MS00 114 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 KIR2DS5A0A0G2JLQ3 304 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 A0A0G2JNG1 304 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 KIR2DS3K7RE56 304 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 RBP4P02753 201 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 PLP2Q04941 152 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 KIR2DS5Q14953 304 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 C12orf74Q32Q52 190 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 Q6P435 159 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
MSH2-201ENST00000233146 KLRF1Q9NZS2 232 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 TANC2Q9HCD6 1990 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 TRAV5A0A0B4J249 113 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 PEX7O00628 323 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
MSH2-201ENST00000233146 VCX2Q9H322 139 aa10.55□□□□□ -0.72
MSH2-201ENST00000233146 CACNA1DQ01668 2161 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 CENPVL3A0A0U1RRI6 287 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 A0A1W2PQM1 296 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 K7EMI3 77 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 M0QXV9 152 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 SLC25A5P05141 298 aaKnown RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 YRDCQ86U90 279 aaKnown RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 GFRA4Q9GZZ7 299 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 FAM106CPP0CH98 169 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 ACP1P24666 158 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 DUTP33316 252 aaKnown RBP10.54□□□□□ -0.72
MSH2-201ENST00000233146 HHEXQ03014 270 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 FAM106AQ4KMX7 169 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 CARD19Q96LW7 228 aa10.54□□□□□ -0.72
MSH2-201ENST00000233146 OR2H1Q9GZK4 316 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms