RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
KNOP1-201ENST00000219837 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
KNOP1-201ENST00000219837 TRBV7-1A0A0A6YYK4 115 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 TRAV8-2A0A0B4J237 113 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 CCDC88CQ9P219 2028 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 GATD1Q8NB37 220 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 SPCS1Q9Y6A9 102 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 TRAV9-1A0A075B6T8 112 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 GZMBP10144 247 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 ZNF474Q6S9Z5 364 aaPredicted RBP9.17□□□□□ -0.94
KNOP1-201ENST00000219837 A0A0A6YYD4 124 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 TMEM178BH3BS89 294 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 IGHV1-8P0DP01 117 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 TIMP3P35625 211 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 DTX1Q86Y01 620 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 UBE2E2Q96LR5 201 aa9.17□□□□□ -0.94
KNOP1-201ENST00000219837 TMEM8BA6NDV4 472 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 LAGE3Q14657 143 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 A0A1B0GTI1 187 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 H3BUX3 64 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 ERVH48-1M5A8F1 160 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 RPL23P62829 140 aaKnown RBP9.16□□□□□ -0.94
KNOP1-201ENST00000219837 DMRT1Q9Y5R6 373 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 B4DSR2 109 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 NTN3O00634 580 aaPredicted RBP9.16□□□□□ -0.94
KNOP1-201ENST00000219837 SRSF6Q13247 344 aaKnown RBP9.16□□□□□ -0.94
KNOP1-201ENST00000219837 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 C1QL4Q86Z23 238 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 SDK1Q7Z5N4 2213 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 IGLV3-12A0A075B6K2 115 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 C1QTNF9P0C862 333 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 PLSCR4Q9NRQ2 329 aa9.16□□□□□ -0.94
KNOP1-201ENST00000219837 SP5Q6BEB4 398 aaPredicted RBP9.15□□□□□ -0.94
KNOP1-201ENST00000219837 MTURNQ8N3F0 131 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 PIP4P2Q8N4L2 257 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 TNFRSF14Q92956 283 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
KNOP1-201ENST00000219837 NPIPB5A8MRT5 1133 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 F2Z2F3 143 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 DUTP33316 252 aaKnown RBP9.15□□□□□ -0.94
KNOP1-201ENST00000219837 FLVCR1-AS1Q8TAF5 88 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 A0A087WX48 190 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 FAM90A9PA6NNJ1 464 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 M0R2P5 195 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 MBD3L1Q8WWY6 194 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 TOMM40O96008 361 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 EFNB3Q15768 340 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 SCRT1Q9BWW7 348 aa9.15□□□□□ -0.94
KNOP1-201ENST00000219837 FCN3O75636 299 aa9.15□□□□□ -0.95
KNOP1-201ENST00000219837 IL18BPO95998 194 aa9.15□□□□□ -0.95
KNOP1-201ENST00000219837 PRR31Q5SQ13 230 aa9.15□□□□□ -0.95
KNOP1-201ENST00000219837 SIPA1L1O43166 1804 aa9.15□□□□□ -0.95
KNOP1-201ENST00000219837 FAM223BA6NKX1 122 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 FAM223AQ8IWN6 122 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 SLC25A39Q9BZJ4 359 aaPredicted RBP9.14□□□□□ -0.95
KNOP1-201ENST00000219837 CCL20P78556 96 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 RUSC1-AS1Q66K80 236 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 PAQR4Q8N4S7 273 aaPredicted RBP9.14□□□□□ -0.95
KNOP1-201ENST00000219837 CD177Q8N6Q3 437 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 H3BUT2 72 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 SERF1AO75920 110 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 ERCC8Q13216 396 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 MINOS1Q5TGZ0 78 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 GGNQ86UU5 652 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 NIT1Q86X76 327 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 EXOC3-AS1Q8N2X6 119 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 RNF166Q96A37 237 aaPredicted RBP9.14□□□□□ -0.95
KNOP1-201ENST00000219837 MESP1Q9BRJ9 268 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 NHP2Q9NX24 153 aaKnown RBP9.14□□□□□ -0.95
KNOP1-201ENST00000219837 MINOS1-NBL1R4GNA1 71 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 A0A087WV48 116 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 IGLV3-32A0A0A0MS00 114 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 FOXL1Q12952 345 aa9.14□□□□□ -0.95
KNOP1-201ENST00000219837 A0A087WWC5 75 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 SHISA3A0PJX4 238 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 BUB1B-PAK6H3BSN5 160 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 INSP01308 110 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 CCL1P22362 96 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 CD300EQ496F6 205 aaPredicted RBP9.13□□□□□ -0.95
KNOP1-201ENST00000219837 WFDC1Q9HC57 220 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 GGTLC3B5MD39 225 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 GAFA1Q96PS6 74 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 VSIRQ9H7M9 311 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 LCTP09848 1927 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 NAPSAO96009 420 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 COL8A2P25067 703 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 JPT2Q9H910 190 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 RNF223E7ERA6 249 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 M0R1W7 72 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 SH2D1AO60880 128 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 SPATA31B1PQ5VZV4 182 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 TEX38Q6PEX7 206 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 Q96MF0 132 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 LSM4Q9Y4Z0 139 aaKnown RBP9.13□□□□□ -0.95
KNOP1-201ENST00000219837 IGFL4Q6B9Z1 124 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 SCN5AQ14524 2016 aa9.13□□□□□ -0.95
KNOP1-201ENST00000219837 F8WEM9 126 aa9.12□□□□□ -0.95
KNOP1-201ENST00000219837 NRN1Q9NPD7 142 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms