RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 THYN1Q9P016 225 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 DOPEY1Q5JWR5 2465 aa13.78□□□□□ -0.2
VRK1-201ENST00000216639 PLXNB1O43157 2135 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 HYPMO75409 117 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 ORM2P19652 201 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 PATE2Q6UY27 113 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 LINC00305Q7Z4B0 112 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 OR1B1Q8NGR6 318 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 ZNF503Q96F45 646 aa13.77□□□□□ -0.21
VRK1-201ENST00000216639 RBM14Q96PK6 669 aaKnown RBP13.77□□□□□ -0.21
VRK1-201ENST00000216639 A0A1W2PRE2 83 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 B4DSR2 109 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 K7EIM0 57 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 IGLC1P0CG04 106 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 RAB5AP20339 215 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 PLP1P60201 277 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 UBE2L3P68036 154 aaKnown RBP13.76□□□□□ -0.21
VRK1-201ENST00000216639 CLEC12BQ2HXU8 276 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 RUSC1-AS1Q66K80 236 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 NRGNQ92686 78 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 FAM167A-AS1Q96KT0 104 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 CFAP46Q8IYW2 2715 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 IGHV7-81A0A0B4J1V7 117 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 TRAV40A0A0B4J280 105 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 SCO2A0A1W2PP80 73 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 OR10J4P0C629 311 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 C11orf52Q96A22 123 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 PAXXQ9BUH6 204 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 OR51M1Q9H341 326 aa13.76□□□□□ -0.21
VRK1-201ENST00000216639 NAV3Q8IVL0 2385 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 IGLV11-55A0A075B6I3 123 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 TRAV30A0A087WSZ9 112 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 TRAV5A0A0B4J249 113 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 C1orf196B1AJZ1 125 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 RAB5BP61020 215 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 NDPQ00604 133 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 ASPHD1Q5U4P2 390 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 ANAPC16Q96DE5 110 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 YPEL4Q96NS1 127 aa13.75□□□□□ -0.21
VRK1-201ENST00000216639 GATA3P23771 443 aa13.74□□□□□ -0.21
VRK1-201ENST00000216639 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
VRK1-201ENST00000216639 C7orf69Q9H7B7 122 aa13.74□□□□□ -0.21
VRK1-201ENST00000216639 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 TRAV20A0A0B4J274 112 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 SCGB2A1O75556 95 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 RD3LP0DJH9 198 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 PSG1P11464 419 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 MFAP4P55083 255 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 ELOBQ15370 118 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 TIGITQ495A1 244 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 ZNF48Q96MX3 618 aaPredicted RBP13.73□□□□□ -0.21
VRK1-201ENST00000216639 DERL1Q9BUN8 251 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 GSX1Q9H4S2 264 aaPredicted RBP13.73□□□□□ -0.21
VRK1-201ENST00000216639 HIGD1AQ9Y241 93 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 H7BYZ3 331 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 HIST1H1BP16401 226 aaKnown RBP13.73□□□□□ -0.21
VRK1-201ENST00000216639 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
VRK1-201ENST00000216639 LINC01551Q86U37 167 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 TMEM68Q96MH6 324 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 FANCD2OSQ96PS1 177 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 MEGF9Q9H1U4 602 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 URGCP-MRPS24S4R325 110 aa13.73□□□□□ -0.21
VRK1-201ENST00000216639 GNG7O60262 68 aa13.72□□□□□ -0.21
VRK1-201ENST00000216639 LYZP61626 148 aa13.72□□□□□ -0.21
VRK1-201ENST00000216639 C16orf82Q7Z2V1 217 aa13.72□□□□□ -0.21
VRK1-201ENST00000216639 OR5B12Q96R08 314 aa13.72□□□□□ -0.21
VRK1-201ENST00000216639 IGKV1-17P01599 117 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 PYYP10082 97 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 EGR2P11161 476 aaPredicted RBP13.71□□□□□ -0.21
VRK1-201ENST00000216639 CD99P14209 185 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 S100PP25815 95 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
VRK1-201ENST00000216639 ZNF343Q6P1L6 599 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 BRD3OSQ6XYD6 125 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 S100A7AQ86SG5 101 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 Q8WTZ3 238 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 HSPB9Q9BQS6 159 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 HIF1ANQ9NWT6 349 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.21
VRK1-201ENST00000216639 A0A0U1RQK1 487 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 C9JCJ5 164 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 PPP1R2P9O14990 202 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 TOMM40O96008 361 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 UNQ5815/PRO19632Q6UWF5 114 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 FAM110DQ8TAY7 271 aaPredicted RBP13.7□□□□□ -0.22
VRK1-201ENST00000216639 FXYD5Q96DB9 178 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 TMUB1Q9BVT8 246 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 LY96Q9Y6Y9 160 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 WNK2Q9Y3S1 2297 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 CRYBB3P26998 211 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 YPEL3P61236 119 aaPredicted RBP13.7□□□□□ -0.22
VRK1-201ENST00000216639 Q56UQ5 140 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
VRK1-201ENST00000216639 TCEAL7Q9BRU2 100 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms