RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 COL27A1Q8IZC6 1860 aaPredicted RBP8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 TEX50A0A1B0GTY4 177 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 A0A1B0GV72 72 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 SMIM27A0A1W2PRY6 76 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 IZUMO1RA6ND01 250 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 M0R1B8 84 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 UPK2O00526 184 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 PYYP10082 97 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 CAMPP49913 170 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 SHISA2Q6UWI4 295 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 ZC2HC1AQ96GY0 325 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 CLEC7AQ9BXN2 247 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 IGF2RP11717 2491 aa8.57□□□□□ -1.04
CX3CL1-201ENST00000006053 SRSF6Q13247 344 aaKnown RBP8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 TNXAQ16473 311 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 CR1LQ2VPA4 569 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 Q56UQ5 140 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 STUMQ69YW2 141 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 SARAFQ96BY9 339 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 IGF2BP2-AS1Q96M15 143 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 SSBP4Q9BWG4 385 aaPredicted RBP8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 ARL2-SNX15V9GYD0 113 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 A0A1W2PRE2 83 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 RBPJQ06330 500 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 BHLHA15Q7RTS1 189 aaPredicted RBP8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 KLHDC1Q8N7A1 406 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 ADTRPQ96IZ2 230 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 CCL13Q99616 98 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 DSCAMO60469 2012 aa8.56□□□□□ -1.04
CX3CL1-201ENST00000006053 CDX4O14627 284 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 PLAUP00749 431 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 IGLV1-44P01699 117 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 RTL8BQ17RB0 113 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SNRNP40Q96DI7 357 aaKnown RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 PLSCR4Q9NRQ2 329 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 PROCRQ9UNN8 238 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 AMMECR1Q9Y4X0 333 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 ATRXP46100 2492 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 M0R2Z0 102 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SAA1P0DJI8 122 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CT45A6P0DMU7 189 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CT45A5P0DMU8 189 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CT45A7P0DMV0 189 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CGB3P0DN86 165 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CGB7P0DN87 165 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 MC5RP33032 325 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 LGALS7P47929 136 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 RPL8P62917 257 aaKnown RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 C1orf162Q8NEQ5 155 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 ATMQ13315 3056 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 NCOR2Q9Y618 2525 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 RNASE2P10153 161 aaKnown RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 PF4V1P10720 104 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 ARF6P62330 175 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 CD69Q07108 199 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 GUSBP1Q15486 140 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 C19orf35Q6ZS72 473 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SPACA3Q8IXA5 215 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 FAM216BQ8N7L0 139 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
CX3CL1-201ENST00000006053 FNDC10F2Z333 226 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 NKX2-8O15522 239 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 COX7A2P2O60397 106 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 REG1BP48304 166 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 PAX2Q02962 417 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 FDCSPQ8NFU4 85 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 COMMD5Q9GZQ3 224 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 RAB9BQ9NP90 201 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 DMXL2Q8TDJ6 3036 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 CD59P13987 128 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 CEACAM3P40198 252 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 SELENOVP59797 346 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 GNG5P63218 68 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 GDF5OSQ5U4N7 250 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 PAXXQ9BUH6 204 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF71Q9NQZ8 489 aaPredicted RBP8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 PRR33A8MZF0 331 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 B9A039 149 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 IGHG3P01860 377 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF883P0CG24 379 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF48Q96MX3 618 aaPredicted RBP8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 WASHC3Q9Y3C0 194 aa8.54□□□□□ -1.04
CX3CL1-201ENST00000006053 CHD8Q9HCK8 2581 aa8.53□□□□□ -1.04
CX3CL1-201ENST00000006053 PLCE1Q9P212 2302 aa8.53□□□□□ -1.04
CX3CL1-201ENST00000006053 TRAV26-1A0A087WT03 109 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms