RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 OR1P1Q8NH06 330 aa17.19■□□□□ 0.34
CHRNA7-228ENST00000637519 IGKV1D-37A0A075B6S9 117 aa17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 MSMBP08118 114 aa17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 ARL14EPLP0DKL9 152 aa17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 EBI3Q14213 229 aa17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 PUS1Q9Y606 427 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 ABCA1O95477 2261 aa17.18■□□□□ 0.34
CHRNA7-228ENST00000637519 NBPF19A0A087WUL8 3843 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 PAX1P15863 534 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 CX3CL1P78423 397 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 PVRIGQ6DKI7 326 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 WNT10AQ9GZT5 417 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 SMDT1Q9H4I9 107 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 GSX1Q9H4S2 264 aaPredicted RBP17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 MT-CO2P00403 227 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 KLF17Q5JT82 389 aaPredicted RBP17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 VAX2Q9UIW0 290 aa17.17■□□□□ 0.34
CHRNA7-228ENST00000637519 IGHV1-69DA0A0B4J2H0 117 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 SOX15O60248 233 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 IGHV1-69P01742 117 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 CD81P60033 236 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 UBE2G2P60604 165 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 AWAT1Q58HT5 328 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 CYP2G1PQ6ZSU1 146 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 MIR17HGQ75NE6 70 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 SUN5Q8TC36 379 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 DOK5Q9P104 306 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 SH2D7A6NKC9 451 aaPredicted RBP17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 M0R036 132 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 PAGE4O60829 102 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 IFNA1P01562 189 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 FAM106CPP0CH98 169 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 KIAA0141Q14154 515 aaPredicted RBP17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 FAM78BQ5VT40 261 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 SLC35E3Q7Z769 313 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 Q8N9W7 124 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 C7orf69Q9H7B7 122 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 HIF1ANQ9NWT6 349 aa17.16■□□□□ 0.34
CHRNA7-228ENST00000637519 STAG3L2P0CL84 134 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 STAG3L3P0CL85 134 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 CTRB1P17538 263 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 ASPHD1Q5U4P2 390 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 CTRB2Q6GPI1 263 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 SPNS3Q6ZMD2 512 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 ARPC1AQ92747 370 aa17.15■□□□□ 0.34
CHRNA7-228ENST00000637519 A0A0U1RQK1 487 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 CRYGCP07315 174 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 PLA2G2AP14555 144 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 DSCR9P59020 149 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 FAM90A2PQ658T7 463 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 A0A096LNT2 108 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 AVPP01185 164 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 RHOBP62745 196 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 MEF2BQ02080 365 aaPredicted RBP17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 RBMS3Q6XE24 437 aaKnown RBP17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 TMEM219Q86XT9 240 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 TMEM37Q8WXS4 190 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 HSPB9Q9BQS6 159 aa17.14■□□□□ 0.33
CHRNA7-228ENST00000637519 TSPAN4O14817 238 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 BRS3P32247 399 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 PSMB3P49720 205 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 MORN5Q5VZ52 161 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 ZNF562Q6V9R5 426 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 S4R3C0 116 aa17.13■□□□□ 0.33
CHRNA7-228ENST00000637519 IGHV7-81A0A0B4J1V7 117 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 TCRBV4S1A1TA0A5B7 111 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 H3BQ15 152 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 THAP8Q8NA92 274 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 MANBALQ9NQG1 85 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 B4DSR2 109 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 SLC25A16P16260 332 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 ATP5G3P48201 142 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 OR4F5Q8NH21 305 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 OR4F4Q96R69 305 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 RPS10P5Q9NQ39 176 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 DOPEY2Q9Y3R5 2298 aa17.12■□□□□ 0.33
CHRNA7-228ENST00000637519 I3L2K1 104 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 PMS2P11Q13670 270 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 ETFRF1Q6IPR1 90 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 UHRF2Q96PU4 802 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 TNFRSF19Q9NS68 423 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 PSMB11A5LHX3 300 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 CORTO00230 105 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 CXorf1O96002 111 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 SRSF8Q9BRL6 282 aaKnown RBP17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 FUT9Q9Y231 359 aa17.11■□□□□ 0.33
CHRNA7-228ENST00000637519 C7orf77A4D0Y5 90 aa17.1■□□□□ 0.33
CHRNA7-228ENST00000637519 EGR2P11161 476 aaPredicted RBP17.1■□□□□ 0.33
CHRNA7-228ENST00000637519 TMEM116Q8NCL8 245 aa17.1■□□□□ 0.33
CHRNA7-228ENST00000637519 NAV2Q8IVL1 2488 aa17.1■□□□□ 0.33
CHRNA7-228ENST00000637519 TRAV5A0A0B4J249 113 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 RNF223E7ERA6 249 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 K7EIM0 57 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 GCHFRP30047 84 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 CST9LP1Q5W188 147 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 OR51G1Q8NGK1 321 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 C11orf94C9JXX5 98 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 OR5G3P0C626 314 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 ZNF674Q2M3X9 581 aa17.09■□□□□ 0.33
CHRNA7-228ENST00000637519 DEFB113Q30KQ7 82 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms