RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 UBAC2Q8NBM4 344 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 TMEM116Q8NCL8 245 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 SLC35E1Q96K37 410 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 CXorf58Q96LI9 332 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 ATP6V0BQ99437 205 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 TXN2Q99757 166 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 SMIM3Q9BZL3 60 aa10.46□□□□□ -0.73
LINC00643-207ENST00000637212 FNDC4Q9H6D8 234 aaPredicted RBP10.46□□□□□ -0.73
LINC00643-207ENST00000637212 A0A0G2JLM5 398 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 MPDU1O75352 247 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 NDUFB8O95169 186 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 PSMB8P28062 276 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 FCGR2BP31994 310 aaPredicted RBP10.45□□□□□ -0.74
LINC00643-207ENST00000637212 RAB9AP51151 201 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 MFAP4P55083 255 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 RHOGP84095 191 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 ATP5G2Q06055 141 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 SLC16A13Q7RTY0 426 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 RNF152Q8N8N0 203 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 OR4F5Q8NH21 305 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 SCGB1C1Q8TD33 95 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 SCARB1Q8WTV0 552 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 WDR83OSQ9Y284 106 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 BOLA1Q9Y3E2 137 aa10.45□□□□□ -0.74
LINC00643-207ENST00000637212 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 OR2J3O76001 311 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 RAB31Q13636 194 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 TMEM95Q3KNT9 176 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 FAM209BQ5JX69 171 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 RPL7L1Q6DKI1 246 aaKnown RBP10.44□□□□□ -0.74
LINC00643-207ENST00000637212 TEPPQ6URK8 271 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 LINC01006Q8NI28 216 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 MS4A10Q96PG2 267 aa10.44□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF471Q9BX82 626 aaPredicted RBP10.44□□□□□ -0.74
LINC00643-207ENST00000637212 WDR61Q9GZS3 305 aaKnown RBP10.44□□□□□ -0.74
LINC00643-207ENST00000637212 GAR1Q9NY12 217 aaKnown RBP10.44□□□□□ -0.74
LINC00643-207ENST00000637212 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 A0A1B0GUS0 222 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 TRGV3P03979 118 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 PF4V1P10720 104 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 TPT1P13693 172 aaKnown RBP10.43□□□□□ -0.74
LINC00643-207ENST00000637212 NPBWR1P48145 328 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 C15orf32Q32M92 178 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 ACSM6Q6P461 480 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 BAP18Q8IXM2 172 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 THAP8Q8NA92 274 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 EEF1AKMT3Q96AZ1 226 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 GNPNAT1Q96EK6 184 aaPredicted RBP10.43□□□□□ -0.74
LINC00643-207ENST00000637212 GINS3Q9BRX5 216 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 C21orf62Q9NYP8 219 aa10.43□□□□□ -0.74
LINC00643-207ENST00000637212 LSM4Q9Y4Z0 139 aaKnown RBP10.43□□□□□ -0.74
LINC00643-207ENST00000637212 FN1P02751 2386 aaKnown RBP10.43□□□□□ -0.74
LINC00643-207ENST00000637212 SMCO3A2RU48 225 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 CLPSL1A2RUU4 121 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 CLN5O75503 358 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 TPPP2P59282 170 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 AKR1C1Q04828 323 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 EIF5AL1Q6IS14 154 aaKnown RBP10.42□□□□□ -0.74
LINC00643-207ENST00000637212 BTNL8Q6UX41 500 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 KLHDC1Q8N7A1 406 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 WIPF2Q8TF74 440 aaPredicted RBP10.42□□□□□ -0.74
LINC00643-207ENST00000637212 WFDC12Q8WWY7 111 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 TAF15Q92804 592 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00643-207ENST00000637212 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 KLK15Q9H2R5 256 aa10.42□□□□□ -0.74
LINC00643-207ENST00000637212 SCGB2A1O75556 95 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 RND2P52198 227 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 KIAA0141Q14154 515 aaPredicted RBP10.41□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 OR5AU1Q8NGC0 362 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 PHYHIPLQ96FC7 376 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 TRGV9Q99603 122 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 MRPL36Q9P0J6 103 aaKnown RBP10.41□□□□□ -0.74
LINC00643-207ENST00000637212 TIMM9Q9Y5J7 89 aa10.41□□□□□ -0.74
LINC00643-207ENST00000637212 TET2Q6N021 2002 aaPredicted RBP10.41□□□□□ -0.74
LINC00643-207ENST00000637212 PLXNB1O43157 2135 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 IGHV3-21A0A0B4J1V1 117 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 UBE2L5PA0A1B0GUS4 154 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 C17orf112F2Z3M2 114 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 IGHV3-48P01763 117 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 CLEC3BP05452 202 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 FABP1P07148 127 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 SEC11BP0C7V7 166 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 FGF7P21781 194 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 SELENOTP62341 195 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF343Q6P1L6 599 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 ZNF491Q8N8L2 437 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 OR4X2Q8NGF9 303 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
LINC00643-207ENST00000637212 PSMG3Q9BT73 122 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms