RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 FOXL1Q12952 345 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 Q96M66 194 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 SCRT1Q9BWW7 348 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 CHCHD2Q9Y6H1 151 aaPredicted RBP14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 SELLP14151 372 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 TRAV8-4A0A0B4J246 113 aa14.87□□□□□ -0.03
CACNA1A-227ENST00000636549 SSBP2P81877 361 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 ANAPC10Q9UM13 185 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 IGHV1-18A0A0C4DH31 117 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 A0A1B0GV90 55 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 MPTX1A8MV57 137 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 TMEM86BQ8N661 226 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 DLX4Q92988 240 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 MSRB2Q9Y3D2 182 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 ZNF876PQ49A33 203 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 ATAD5Q96QE3 1844 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 RP1L1Q8IWN7 2480 aaPredicted RBP14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 DPRXA6NFQ7 191 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 RALGAPA1Q6GYQ0 2036 aa14.86□□□□□ -0.03
CACNA1A-227ENST00000636549 NAPSAO96009 420 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 PRR30Q53SZ7 412 aaPredicted RBP14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 SPTBP11277 2137 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 ARAP2Q8WZ64 1704 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 TRAV25A0A0B4J276 109 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 A0A0G2JK05 382 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 RP1P56715 2156 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 A0A1B0GUT8 65 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 PLPPR1Q8TBJ4 325 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 C6orf226Q5I0X4 101 aa14.85□□□□□ -0.03
CACNA1A-227ENST00000636549 SYNJ2BPP57105 145 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 C15orf32Q32M92 178 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 ZNF672Q499Z4 452 aaPredicted RBP14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 EXOC3-AS1Q8N2X6 119 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 XCL2Q9UBD3 114 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 H3BUT2 72 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 C10orf55Q5SWW7 151 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 EREGO14944 169 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 PRTN3P24158 256 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 MDS2Q8NDY4 140 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 DEFB105AQ8NG35 78 aa14.84□□□□□ -0.03
CACNA1A-227ENST00000636549 RNF125Q96EQ8 232 aa14.83□□□□□ -0.03
CACNA1A-227ENST00000636549 TMEM133Q9H2Q1 129 aa14.83□□□□□ -0.03
CACNA1A-227ENST00000636549 GDF15Q99988 308 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 TMEM126AQ9H061 195 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 FER1L5A0AVI2 2057 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 PGPEP1LA6NFU8 196 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 DUSP14O95147 198 aaKnown RBP14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 M0R2P5 195 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 MT-ND6P03923 174 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 ZNF562Q6V9R5 426 aa14.83□□□□□ -0.04
CACNA1A-227ENST00000636549 ARID1AO14497 2285 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 ZNF236Q9UL36 1845 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 TRGV11A0A075B6L2 103 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 VAX1Q5SQQ9 334 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 Q8TAT8 98 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 COL11A1P12107 1806 aaPredicted RBP14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 HLA-DQB1P01920 261 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 SMIM8Q96KF7 97 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 LRP5O75197 1615 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 QSER1Q2KHR3 1735 aa14.82□□□□□ -0.04
CACNA1A-227ENST00000636549 SRRM4A7MD48 611 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 TCRAP04437 139 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 ERCC8Q13216 396 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 ORMDL3Q8N138 153 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 THAP8Q8NA92 274 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 Q9HAA7 133 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 FABP5P3A8MUU1 101 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 DERL1Q9BUN8 251 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 DAD1P61803 113 aa14.81□□□□□ -0.04
CACNA1A-227ENST00000636549 YLPM1P49750 1951 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 IGHV3-38A0A0C4DH36 116 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 TM4SF5O14894 197 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 ZNF600Q6ZNG1 722 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 MEGF9Q9H1U4 602 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 LINC00299Q6ZSB3 139 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 SPSB3Q6PJ21 355 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 HIST1H2BAQ96A08 127 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 KLK9Q9UKQ9 250 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 BPESC1Q9GZL8 116 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 PAX9P55771 341 aa14.8□□□□□ -0.04
CACNA1A-227ENST00000636549 FAM209AQ5JX71 171 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 LINC00312Q9Y6C7 94 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 RAG2P55895 527 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 ORAOV1Q8WV07 137 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 CHD5Q8TDI0 1954 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 ZNF561-AS1K7EIQ3 104 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 ADMP35318 185 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 POC1AQ8NBT0 407 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 GAGE12JA6NER3 117 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 SRSF1Q07955 248 aaKnown RBP eCLIP14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 GAGE1Q13065 139 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 GAGE4Q13068 117 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 GAGE5Q13069 117 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 GAGE13Q4V321 117 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 IGHV1-46P01743 117 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 ZNF708P17019 499 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
CACNA1A-227ENST00000636549 MRPS18AQ9NVS2 196 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms