RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 EDA2RQ9HAV5 297 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 HTN3P15516 51 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 OR4D11Q8NGI4 311 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 WNT10AQ9GZT5 417 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 A8MWV9 139 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 TMEM187Q14656 261 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 TMEM91Q6ZNR0 172 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 DPM3Q9P2X0 92 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 SEC11AP67812 179 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 TMEM249Q2WGJ8 235 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 APCDD1LQ8NCL9 501 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 ZNF600Q6ZNG1 722 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 TRBV5-7A0A0A0MS05 114 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 NRN1LQ496H8 165 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 ZNF826PQ6ZT77 177 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 CHCHD1Q96BP2 118 aaKnown RBP11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 SIGMAR1Q99720 223 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 LEPROTO15243 131 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 LAGE3Q14657 143 aa11.16□□□□□ -0.62
SYNGAP1-208ENST00000629380 SRSF4Q08170 494 aaKnown RBP11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 ZPLD1Q8TCW7 415 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 TOMM40O96008 361 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 PRDM13Q9H4Q3 707 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 HBDP02042 147 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 LIMS1P48059 325 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 POC1AQ8NBT0 407 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 PRADC1Q9BSG0 188 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 HS3ST3B1Q9Y662 390 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 NUP210LQ5VU65 1888 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 PRR32B1ATL7 298 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 A0A0J9YW62 118 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 NPIPB3Q92617 1050 aa11.15□□□□□ -0.62
SYNGAP1-208ENST00000629380 SNAI3Q3KNW1 292 aa11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 CACNA1AO00555 2505 aa11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 NDUFS8O00217 210 aa11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 ZNF106Q9H2Y7 1883 aaKnown RBP11.15□□□□□ -0.63
SYNGAP1-208ENST00000629380 IL11P20809 199 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 BSPH1Q075Z2 132 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 WDYHV1Q96HA8 205 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 VKORC1Q9BQB6 163 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 C14orf144Q96I85 54 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 A0A1W2PPV9 198 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 H3BTX0 84 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 ZNF703Q9H7S9 590 aaPredicted RBP11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 RPL32P62910 135 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 MUC6Q6W4X9 2439 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 RPL39P5Q59GN2 51 aa11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 ANKHD1Q8IWZ3 2542 aaKnown RBP11.14□□□□□ -0.63
SYNGAP1-208ENST00000629380 TRBV5-3A0A0A0MS03 114 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 FUT5Q11128 374 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 CHTOPQ9Y3Y2 248 aaKnown RBP11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 VWC2LB2RUY7 222 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 DRAM1Q8N682 238 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 LAMTOR3Q9UHA4 124 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 KLF12Q9Y4X4 402 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 NBR2O15453 112 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 IGKV1D-42A0A075B6H8 117 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 GLRXP35754 106 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 ERVK11-1P61568 191 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 SLC25A38Q96DW6 304 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 LEAP2Q969E1 77 aa11.13□□□□□ -0.63
SYNGAP1-208ENST00000629380 IGKV1D-16P01601 117 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 C19orf48Q6RUI8 117 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 ATP5L2Q7Z4Y8 100 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 DTX4Q9Y2E6 619 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 HLA-DQB1P01920 261 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 CT83Q5H943 113 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 COQ2Q96H96 371 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 COX6A1P12074 109 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 ASPHD2Q6ICH7 369 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 NTN1O95631 604 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 TGFAP01135 160 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 FOXA3P55318 350 aaPredicted RBP11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 EFNB1P98172 346 aa11.12□□□□□ -0.63
SYNGAP1-208ENST00000629380 TRAV9-2A0A087WT02 112 aa11.11□□□□□ -0.63
SYNGAP1-208ENST00000629380 TCRBV4S1A1TA0A5B7 111 aa11.11□□□□□ -0.63
SYNGAP1-208ENST00000629380 CGAP01215 116 aa11.11□□□□□ -0.63
SYNGAP1-208ENST00000629380 EGR4Q05215 589 aa11.11□□□□□ -0.63
SYNGAP1-208ENST00000629380 NHLRC3Q5JS37 347 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms