RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 OR4E1P0C645 316 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 HTR2BP41595 481 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 MFAP4P55083 255 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 TATDN3Q17R31 274 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 GGNBP1Q5YKI7 109 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 LCN12Q6JVE5 192 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 UXS1Q8NBZ7 420 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
DDX41-219ENST00000629036 WDR89Q96FK6 387 aaPredicted RBP8.34□□□□□ -1.07
DDX41-219ENST00000629036 PDCD10Q9BUL8 212 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 C19orf73Q9NVV2 129 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 GAR1Q9NY12 217 aaKnown RBP8.34□□□□□ -1.07
DDX41-219ENST00000629036 TMED3Q9Y3Q3 217 aa8.34□□□□□ -1.07
DDX41-219ENST00000629036 C15orf62A8K5M9 175 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 PRSS46E5RG02 174 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 CORTO00230 105 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 SCAF4O95104 1147 aaKnown RBP8.33□□□□□ -1.08
DDX41-219ENST00000629036 LY86O95711 162 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 TMEM50AO95807 157 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 NPY1RP25929 384 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 SNCAP37840 140 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 INPP1P49441 399 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 ASAH1Q13510 395 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 Q56UQ5 140 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 PRSS54Q6PEW0 395 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 BTNL8Q6UX41 500 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 UBAC2Q8NBM4 344 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 OR4X1Q8NH49 305 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 DTD1Q8TEA8 209 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 S100ZQ8WXG8 99 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 DAZ1Q9NQZ3 744 aaKnown RBP8.33□□□□□ -1.08
DDX41-219ENST00000629036 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 TECRQ9NZ01 308 aaKnown RBP8.33□□□□□ -1.08
DDX41-219ENST00000629036 SMAD5-AS1Q9Y6J3 95 aa8.33□□□□□ -1.08
DDX41-219ENST00000629036 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 CEBPZOSA8MTT3 80 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 K7EMT4 169 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 CLN5O75503 358 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 UPK1BO75841 260 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 TCRBP04435 133 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 HOXB5P09067 269 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 FRMD6-AS1P0C7T7 363 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 IGLC1P0CG04 106 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 IGHV4-30-4P0DP06 118 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 DCTN2Q13561 401 aaKnown RBP8.32□□□□□ -1.08
DDX41-219ENST00000629036 TOMM20LQ6UXN7 152 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 LINC00322Q6ZN03 302 aaPredicted RBP8.32□□□□□ -1.08
DDX41-219ENST00000629036 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 OR4D5Q8NGN0 318 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 RNASEH2CQ8TDP1 164 aaKnown RBP8.32□□□□□ -1.08
DDX41-219ENST00000629036 MITD1Q8WV92 249 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 MARC2Q969Z3 335 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 WFDC10AQ9H1F0 79 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 HEYLQ9NQ87 328 aaPredicted RBP8.32□□□□□ -1.08
DDX41-219ENST00000629036 MRPL27Q9P0M9 148 aaKnown RBP8.32□□□□□ -1.08
DDX41-219ENST00000629036 UFC1Q9Y3C8 167 aa8.32□□□□□ -1.08
DDX41-219ENST00000629036 AGRNO00468 2067 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 PIGBOS1A0A0B4J2F0 54 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 CENPXA8MT69 81 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 NUPL2O15504 423 aaKnown RBP8.31□□□□□ -1.08
DDX41-219ENST00000629036 ZNF207O43670 478 aaKnown RBP8.31□□□□□ -1.08
DDX41-219ENST00000629036 CD7P09564 240 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 OPRK1P41145 380 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 SUB1P53999 127 aaKnown RBP eCLIP8.31□□□□□ -1.08
DDX41-219ENST00000629036 ID3Q02535 119 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 FAM90A2PQ658T7 463 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 OR1S1Q8NH92 325 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 DYNLRB2Q8TF09 96 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 PALMDQ9NP74 551 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 ENY2Q9NPA8 101 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 NUDT15Q9NV35 164 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 CACFD1Q9UGQ2 172 aa8.31□□□□□ -1.08
DDX41-219ENST00000629036 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 IGKV1D-37A0A075B6S9 117 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 TRAV6A0A075B6T7 132 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 IGHV7-4-1A0A0J9YVY3 117 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 CHEK1O14757 476 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 GNG7O60262 68 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 APOHP02749 345 aaPredicted RBP8.3□□□□□ -1.08
DDX41-219ENST00000629036 IAPPP10997 89 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 NPBWR1P48145 328 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 RND2P52198 227 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 RELQ04864 619 aaPredicted RBP8.3□□□□□ -1.08
DDX41-219ENST00000629036 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 ZNF600Q6ZNG1 722 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 LILRB2Q8N423 598 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 DUSP18Q8NEJ0 188 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 SEC22CQ9BRL7 303 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 WDR12Q9GZL7 423 aaKnown RBP8.3□□□□□ -1.08
DDX41-219ENST00000629036 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 SMPXQ9UHP9 88 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 U3KQ87 197 aa8.3□□□□□ -1.08
DDX41-219ENST00000629036 IGKV1OR2-108A0A075B7D4 117 aa8.29□□□□□ -1.08
DDX41-219ENST00000629036 TRAV25A0A0B4J276 109 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms