RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 TRAPPC2LQ9UL33 140 aa10.74□□□□□ -0.69
FOXN3-219ENST00000615335 HELZ2Q9BYK8 2649 aaKnown RBP10.74□□□□□ -0.69
FOXN3-219ENST00000615335 IGKV1-5P01602 117 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 LINC00869P0C866 280 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 AZU1P20160 251 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 LOXP28300 417 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-219ENST00000615335 LGALS4P56470 323 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 ZNF672Q499Z4 452 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-219ENST00000615335 ATOH7Q8N100 152 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 MTURNQ8N3F0 131 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 OR2Z1Q8NG97 314 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 CLEC7AQ9BXN2 247 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 HRNRQ86YZ3 2850 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-219ENST00000615335 TRAV8-6A0A0B4J262 113 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 MUC21A0A0G2JKD1 596 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.73□□□□□ -0.69
FOXN3-219ENST00000615335 IGHV3-64DA0A0J9YX35 117 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 A1L4Q6 167 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 NPPCP23582 126 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 IER3P46695 156 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 ZNF497Q6ZNH5 498 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
FOXN3-219ENST00000615335 LIN7CQ9NUP9 197 aaKnown RBP10.73□□□□□ -0.69
FOXN3-219ENST00000615335 TENM4Q6N022 2769 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 OR2H2O95918 312 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 HLA-DRB1P01911 266 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 RAB9AP51151 201 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 ARL16Q0P5N6 197 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 ZNF585BQ52M93 769 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 Q8IYB0 196 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 STXBP6Q8NFX7 210 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 OR2V2Q96R30 315 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 SLC25A22Q9H936 323 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 KIAA2026Q5HYC2 2103 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 SPRY3O43610 288 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 IGKV1D-33P01593 117 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 IGKV1-33P01594 117 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 GNB1P62873 340 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 HTD2P86397 168 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 SLC25A34Q6PIV7 304 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 UBALD1Q8TB05 177 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 POLDIP2Q9Y2S7 368 aa10.72□□□□□ -0.69
FOXN3-219ENST00000615335 DCHS2Q6V1P9 2916 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 GRPP07492 148 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 CRYBA4P53673 196 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 RELBQ01201 579 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 RPEL1Q2QD12 228 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 WDR86Q86TI4 376 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 TSKUQ8WUA8 353 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
FOXN3-219ENST00000615335 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.69
FOXN3-219ENST00000615335 CACNA1DQ01668 2161 aa10.71□□□□□ -0.7
FOXN3-219ENST00000615335 RAB29O14966 203 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 CLDN1O95832 211 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 REG1BP48304 166 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 CKS1BP61024 79 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 TCTEX1D4Q5JR98 221 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 SPANXN5Q5MJ07 72 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 WDR82Q6UXN9 313 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 OR8B3Q8NGG8 313 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 AP1S3Q96PC3 154 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 OR4C12Q96R67 309 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 OR8B2Q96RD0 313 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 CHRDL1Q9BU40 450 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 CXXC4Q9H2H0 198 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 USP9YO00507 2555 aaPredicted RBP10.7□□□□□ -0.7
FOXN3-219ENST00000615335 B9A039 149 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 ERVK11-1P61568 191 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 C5orf64Q2M2E5 130 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 DRAM1Q8N682 238 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 EAF1Q96JC9 268 aaPredicted RBP10.7□□□□□ -0.7
FOXN3-219ENST00000615335 RCHY1Q96PM5 261 aa10.7□□□□□ -0.7
FOXN3-219ENST00000615335 NDUFB4O95168 129 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 UBE2G1P62253 170 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 SEC11AP67812 179 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 HIST1H1AQ02539 215 aaPredicted RBP10.69□□□□□ -0.7
FOXN3-219ENST00000615335 MZT1Q08AG7 82 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
FOXN3-219ENST00000615335 ZNF439Q8NDP4 499 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 COMMD5Q9GZQ3 224 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 DYNLRB1Q9NP97 96 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 MBNL3Q9NUK0 354 aaKnown RBP10.69□□□□□ -0.7
FOXN3-219ENST00000615335 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 C7orf71A4D174 169 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 K7EP34 96 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 EFNB3Q15768 340 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 PRAMEF6Q5VXH4 476 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 ACSM6Q6P461 480 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 ARFGEF3Q5TH69 2177 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 CRYBG3Q68DQ2 2970 aa10.69□□□□□ -0.7
FOXN3-219ENST00000615335 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
FOXN3-219ENST00000615335 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
FOXN3-219ENST00000615335 FAM90A26D6RGX4 464 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms