RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 NPBWR1P48145 328 aa19.66■□□□□ 0.74
VEGFA-226ENST00000611736 ELLP55199 621 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-226ENST00000611736 RELQ04864 619 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-226ENST00000611736 FNDC4Q9H6D8 234 aaPredicted RBP19.66■□□□□ 0.74
VEGFA-226ENST00000611736 ZNF207O43670 478 aaKnown RBP19.65■□□□□ 0.74
VEGFA-226ENST00000611736 OR4E1P0C645 316 aa19.65■□□□□ 0.74
VEGFA-226ENST00000611736 MLANAQ16655 118 aa19.65■□□□□ 0.74
VEGFA-226ENST00000611736 BTNL8Q6UX41 500 aa19.65■□□□□ 0.74
VEGFA-226ENST00000611736 MARC2Q969Z3 335 aa19.65■□□□□ 0.74
VEGFA-226ENST00000611736 TMED3Q9Y3Q3 217 aa19.65■□□□□ 0.74
VEGFA-226ENST00000611736 YIF1AO95070 293 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 NPY1RP25929 384 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 DHRS2Q13268 280 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 GUCA2BQ16661 112 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 C4orf46Q504U0 113 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 C2orf83Q53S99 150 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 Q8N1Y9 231 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 DTD1Q8TEA8 209 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 ZNF414Q96IQ9 312 aa19.64■□□□□ 0.73
VEGFA-226ENST00000611736 DAZ1Q9NQZ3 744 aaKnown RBP19.64■□□□□ 0.73
VEGFA-226ENST00000611736 MRPL36Q9P0J6 103 aaKnown RBP19.64■□□□□ 0.73
VEGFA-226ENST00000611736 MRPL27Q9P0M9 148 aaKnown RBP19.64■□□□□ 0.73
VEGFA-226ENST00000611736 PITX3O75364 302 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 C8orf88P0DMB2 117 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 GGNBP1Q5YKI7 109 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 LYG2Q86SG7 212 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 GTSCR1Q86UQ5 136 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 TMEM170AQ8WVE7 144 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 WDR89Q96FK6 387 aaPredicted RBP19.63■□□□□ 0.73
VEGFA-226ENST00000611736 ASCL2Q99929 193 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 C20orf85Q9H1P6 137 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 BATF3Q9NR55 127 aa19.63■□□□□ 0.73
VEGFA-226ENST00000611736 ZNF785A8K8V0 405 aa19.62■□□□□ 0.73
VEGFA-226ENST00000611736 IFNA10P01566 189 aa19.62■□□□□ 0.73
VEGFA-226ENST00000611736 SLC25A6P12236 298 aa19.62■□□□□ 0.73
VEGFA-226ENST00000611736 TMEM61Q8N0U2 210 aa19.62■□□□□ 0.73
VEGFA-226ENST00000611736 RPS10-NUDT3A0A1W2PQS6 291 aa19.61■□□□□ 0.73
VEGFA-226ENST00000611736 COQ8AQ8NI60 647 aa19.61■□□□□ 0.73
VEGFA-226ENST00000611736 ADAP1O75689 374 aa19.6■□□□□ 0.73
VEGFA-226ENST00000611736 SCAF4O95104 1147 aaKnown RBP19.6■□□□□ 0.73
VEGFA-226ENST00000611736 TMEM50AO95807 157 aa19.6■□□□□ 0.73
VEGFA-226ENST00000611736 FRMD6-AS1P0C7T7 363 aa19.6■□□□□ 0.73
VEGFA-226ENST00000611736 OR4X1Q8NH49 305 aa19.6■□□□□ 0.73
VEGFA-226ENST00000611736 RNASEH2CQ8TDP1 164 aaKnown RBP19.6■□□□□ 0.73
VEGFA-226ENST00000611736 WDR12Q9GZL7 423 aaKnown RBP19.6■□□□□ 0.73
VEGFA-226ENST00000611736 U3KQ87 197 aa19.6■□□□□ 0.73
VEGFA-226ENST00000611736 TRAV6A0A075B6T7 132 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 C15orf62A8K5M9 175 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 K7EMT4 169 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 CLN5O75503 358 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 TCRBP04435 133 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 IGHV4-30-4P0DP06 118 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 IAPPP10997 89 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 CD81P60033 236 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 ZNF846Q147U1 533 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 NOXA1Q86UR1 476 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 OR52B4Q8NGK2 314 aa19.59■□□□□ 0.73
VEGFA-226ENST00000611736 HUWE1Q7Z6Z7 4374 aaKnown RBP19.58■□□□□ 0.73
VEGFA-226ENST00000611736 ZNF600Q6ZNG1 722 aa19.58■□□□□ 0.72
VEGFA-226ENST00000611736 MAGT1Q9H0U3 335 aa19.58■□□□□ 0.72
VEGFA-226ENST00000611736 TBC1D24Q9ULP9 559 aa19.58■□□□□ 0.72
VEGFA-226ENST00000611736 FAM90A26D6RGX4 464 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 PRSS54Q6PEW0 395 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 TOMM20LQ6UXN7 152 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 RBPMS2Q6ZRY4 209 aaKnown RBP19.57■□□□□ 0.72
VEGFA-226ENST00000611736 OR10C1Q96KK4 312 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 NEURL2Q9BR09 285 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 NUDT15Q9NV35 164 aa19.57■□□□□ 0.72
VEGFA-226ENST00000611736 IGHV3-49A0A0A0MS15 119 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 MPTX1A8MV57 137 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 MED6O75586 246 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 IFNA21P01568 189 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 IFNA4P05014 189 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 CD7P09564 240 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 SLC25A4P12235 298 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 RND2P52198 227 aa19.56■□□□□ 0.72
VEGFA-226ENST00000611736 PUS1Q9Y606 427 aaKnown RBP eCLIP19.56■□□□□ 0.72
VEGFA-226ENST00000611736 FAM240BA0A1B0GVZ2 78 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 SCGB2A1O75556 95 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 TIGITQ495A1 244 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 ETFRF1Q6IPR1 90 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 MZT2BQ6NZ67 158 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 SMPXQ9UHP9 88 aa19.55■□□□□ 0.72
VEGFA-226ENST00000611736 TRAV14DV4A0A0A6YYC5 116 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 TRAV25A0A0B4J276 109 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 IGHV7-4-1A0A0J9YVY3 117 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 UPK1BO75841 260 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 NHLRC4P0CG21 123 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-226ENST00000611736 SLC16A13Q7RTY0 426 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 SBSPONQ8IVN8 264 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 TMEM116Q8NCL8 245 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 MITD1Q8WV92 249 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 GINS3Q9BRX5 216 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 TUBA4BQ9H853 241 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 ZFAND3Q9H8U3 227 aa19.54■□□□□ 0.72
VEGFA-226ENST00000611736 PAIP2BQ9ULR5 123 aaKnown RBP19.54■□□□□ 0.72
VEGFA-226ENST00000611736 IGHV3OR16-13A0A075B7E8 117 aa19.53■□□□□ 0.72
VEGFA-226ENST00000611736 TRAV30A0A087WSZ9 112 aa19.53■□□□□ 0.72
VEGFA-226ENST00000611736 IGHV3-74A0A0B4J1X5 117 aa19.53■□□□□ 0.72
VEGFA-226ENST00000611736 SYNGR2O43760 224 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms