RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 SLC2A1P11166 492 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 FMO3P31513 532 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 NCALDP61601 193 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 PRR4Q16378 134 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 RSPO1Q2MKA7 263 aaPredicted RBP2.98□□□□□ -1.93
LINC00540-201ENST00000611481 HLA-DRB5Q30154 266 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 NHLRC3Q5JS37 347 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 AKAP14Q86UN6 197 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 ZFP82Q8N141 532 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 CCDC54Q8NEL0 328 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 OR10J6PQ8NGY7 276 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 OR11H2Q8NH07 326 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 OR9G1Q8NH87 305 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 DYNLRB2Q8TF09 96 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 PACRGQ96M98 296 aaPredicted RBP2.98□□□□□ -1.93
LINC00540-201ENST00000611481 TMEM56Q96MV1 263 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 MRPL57Q9BQC6 102 aaKnown RBP2.98□□□□□ -1.93
LINC00540-201ENST00000611481 SULT4A1Q9BR01 284 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 ARV1Q9H2C2 271 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 TMEM27Q9HBJ8 222 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 POLR1DQ9Y2S0 133 aa2.98□□□□□ -1.93
LINC00540-201ENST00000611481 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 IGHV3-72A0A0B4J1Y9 119 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 TRAV41A0A0B4J266 112 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 H7C1C5 153 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 H7C1H1 209 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 SRSF10O75494 262 aaKnown RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 LYPLA1O75608 230 aaPredicted RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 ISG15P05161 165 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 BCHEP06276 602 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 ASAH2BP0C7U1 165 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 LINC00032P0C843 101 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 RCC1P18754 421 aaPredicted RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 TAC1P20366 129 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 BTCP35070 178 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 CLDN12P56749 244 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 LSM6P62312 80 aaKnown RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 LCN6P62502 163 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 DIAPH2-AS1Q14236 149 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 OR1Q1Q15612 314 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 CEACAM21Q3KPI0 293 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 RNF212Q495C1 297 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 GLYATL3Q5SZD4 288 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 CD200R1LQ6Q8B3 271 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 C3orf62Q6ZUJ4 267 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 Q6ZVH6 145 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 OAFQ86UD1 273 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 LINC00471Q8N535 108 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 CCNYL1Q8N7R7 359 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 ZFP41Q8N8Y5 198 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 NKAPP1Q8N9T2 125 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 OR4A5Q8NH83 315 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 SLC35B4Q969S0 331 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 FAM3DQ96BQ1 224 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 MRAP2Q96G30 205 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 PPP1R36Q96LQ0 422 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 C1orf50Q9BV19 199 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 YTHDF1Q9BYJ9 559 aaKnown RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 RHOFQ9HBH0 211 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 ZNF286AQ9HBT8 521 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 EXOSC4Q9NPD3 245 aaKnown RBP2.97□□□□□ -1.93
LINC00540-201ENST00000611481 PARP11Q9NR21 331 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 COMMD9Q9P000 198 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 SIGLEC7Q9Y286 467 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 ZNF257Q9Y2Q1 563 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 FIS1Q9Y3D6 152 aa2.97□□□□□ -1.93
LINC00540-201ENST00000611481 DSCAML1Q8TD84 2053 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 A0A087X002 238 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 TRAV8-4A0A0B4J246 113 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 hADV38S2A0JD32 116 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 CXCR6O00574 342 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 SLC31A2O15432 143 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 P01737 135 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 SEMG1P04279 462 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 TCRBP04435 133 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 EIF4EP06730 217 aaKnown RBP2.96□□□□□ -1.94
LINC00540-201ENST00000611481 PGAM2P15259 253 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 RAB3BP20337 219 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 CRISP3P54108 245 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 MTPNP58546 118 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 ARPC4P59998 168 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 AESQ08117 197 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 EDDM3AQ14507 147 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 ZNF266Q14584 549 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 GUK1Q16774 197 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 DEFB114Q30KQ6 69 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 C2orf66Q6UXQ4 117 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 TEX43Q6ZNM6 134 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 FAM19A5Q7Z5A7 132 aaPredicted RBP2.96□□□□□ -1.94
LINC00540-201ENST00000611481 TRAPPC6BQ86SZ2 158 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 RIMKLAQ8IXN7 391 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 OR6V1Q8N148 313 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 C4orf33Q8N1A6 199 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 TMEM252Q8N6L7 170 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 Q8NBF4 154 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 OR6T1Q8NGN1 323 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 RDH12Q96NR8 316 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 NRIP2Q9BQI9 281 aa2.96□□□□□ -1.94
LINC00540-201ENST00000611481 RTL8AQ9BWD3 113 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms