RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TGFAP01135 160 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 LINC00869P0C866 280 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 ICAM4Q14773 271 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 KLF17Q5JT82 389 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-218ENST00000600383 Q5PR19 223 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 C10orf91Q5T1B1 145 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 LINC01356Q8N9X3 169 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 ARPC1AQ92747 370 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 RASL11BQ9BPW5 248 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 BEX4Q9NWD9 120 aaPredicted RBP12.03□□□□□ -0.48
HIF3A-218ENST00000600383 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
HIF3A-218ENST00000600383 MT-CO2P00403 227 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PRR20EP86478 221 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PRR20CP86479 221 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PRR20DP86480 221 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PRR20BP86481 221 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PRR20AP86496 221 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 ZNF90Q03938 601 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 Q8N9W7 124 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.48
HIF3A-218ENST00000600383 CARHSP1Q9Y2V2 147 aaKnown RBP12.02□□□□□ -0.48
HIF3A-218ENST00000600383 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.49
HIF3A-218ENST00000600383 NDPQ00604 133 aa12.02□□□□□ -0.49
HIF3A-218ENST00000600383 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
HIF3A-218ENST00000600383 TMEM219Q86XT9 240 aa12.02□□□□□ -0.49
HIF3A-218ENST00000600383 GATAD1Q8WUU5 269 aa12.02□□□□□ -0.49
HIF3A-218ENST00000600383 A0A096LNT2 108 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 LOC102723971A0A1B0GUV8 181 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SH2D7A6NKC9 451 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SEC14L6B5MCN3 397 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 CORTO00230 105 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 BCL2P10415 239 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 AKIRIN2Q53H80 203 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 KHDC3LQ587J8 217 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 FAM78BQ5VT40 261 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SPATA31B1PQ5VZV4 182 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 RBMS3Q6XE24 437 aaKnown RBP12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SLC35E3Q7Z769 313 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SMDT1Q9H4I9 107 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 IFNA1P01562 189 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SOHLH1Q5JUK2 328 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 OR5T1Q8NG75 326 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SSX3Q99909 188 aa12.01□□□□□ -0.49
HIF3A-218ENST00000600383 SRSF8Q9BRL6 282 aaKnown RBP12.01□□□□□ -0.49
HIF3A-218ENST00000600383 NKX6-2Q9C056 277 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-218ENST00000600383 GSX1Q9H4S2 264 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-218ENST00000600383 ZANQ9Y493 2812 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 IGHV7-81A0A0B4J1V7 117 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 NUPL2O15504 423 aaKnown RBP12□□□□□ -0.49
HIF3A-218ENST00000600383 SRP19P09132 144 aaKnown RBP12□□□□□ -0.49
HIF3A-218ENST00000600383 RHOBP62745 196 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 PVRIGQ6DKI7 326 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 CYB561D1Q8N8Q1 229 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 DOK5Q9P104 306 aa12□□□□□ -0.49
HIF3A-218ENST00000600383 SNAPINO95295 136 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 HSPB1P04792 205 aaKnown RBP11.99□□□□□ -0.49
HIF3A-218ENST00000600383 CRYGCP07315 174 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 ARL14EPLP0DKL9 152 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 GATA3P23771 443 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 ASPHD1Q5U4P2 390 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 Q96MF0 132 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 HSPB9Q9BQS6 159 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 TNFRSF19Q9NS68 423 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 VAX2Q9UIW0 290 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 IGKV1D-37A0A075B6S9 117 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 PSMB3P49720 205 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 LY6EQ16553 131 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 LRRC75A-AS1Q8N1F1 130 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 C20orf24Q9BUV8 137 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 S4R3C0 116 aa11.99□□□□□ -0.49
HIF3A-218ENST00000600383 PAGE4O60829 102 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 NPBWR1P48145 328 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 UBE2G2P60604 165 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 LOXL1Q08397 574 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-218ENST00000600383 MIR17HGQ75NE6 70 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 TMEM116Q8NCL8 245 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 PIFOQ8TCI5 191 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 TMUB1Q9BVT8 246 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 MEGF9Q9H1U4 602 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
HIF3A-218ENST00000600383 I3L2K1 104 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 HLA-DRB1P01911 266 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 STAG3L2P0CL84 134 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 STAG3L3P0CL85 134 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 EGR2P11161 476 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-218ENST00000600383 ATF4P18848 351 aaPredicted RBP11.98□□□□□ -0.49
HIF3A-218ENST00000600383 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 THAP8Q8NA92 274 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 TMEM37Q8WXS4 190 aa11.98□□□□□ -0.49
HIF3A-218ENST00000600383 PRRC2AP48634 2157 aaKnown RBP11.97□□□□□ -0.49
HIF3A-218ENST00000600383 M0R036 132 aa11.97□□□□□ -0.49
HIF3A-218ENST00000600383 CXorf1O96002 111 aa11.97□□□□□ -0.49
HIF3A-218ENST00000600383 ECSCRQ19T08 205 aa11.97□□□□□ -0.49
HIF3A-218ENST00000600383 OR4X1Q8NH49 305 aa11.97□□□□□ -0.49
HIF3A-218ENST00000600383 LINC01548A6NM66 108 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms