RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	USMG5	Q96IX5	58 aa		17.04	■□□□□ 0.32
LTBP4-227	ENST00000600026	TNFSF18	Q9UNG2	199 aa		17.04	■□□□□ 0.32
LTBP4-227	ENST00000600026	HMSD	A8MTL9	139 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	CST7	O76096	145 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	NDUFB8	O95169	186 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	MT-CO2	P00403	227 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	GPX4	P36969	197 aa	Predicted RBP	17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	CDX1	P47902	265 aa	Predicted RBP	17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	DEFA5	Q01523	94 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	ZNF491	Q8N8L2	437 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	KLHL30-AS1	Q8NEE0	82 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	CXorf58	Q96LI9	332 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	HYLS1	Q96M11	299 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	AQP10	Q96PS8	301 aa		17.03	■□□□□ 0.32
LTBP4-227	ENST00000600026	PMS2P5	A8MQ11	134 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	NUDT19	A8MXV4	375 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	ARPC5	O15511	151 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	TSPAN15	O95858	294 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	CD69	Q07108	199 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	C15orf32	Q32M92	178 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	OR11H4	Q8NGC9	324 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	VN1R17P	Q8TDU5	208 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	CACNG8	Q8WXS5	425 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	UBE2E2	Q96LR5	201 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	GNB4	Q9HAV0	340 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026	HSPB11	Q9Y547	144 aa		17.02	■□□□□ 0.32
LTBP4-227	ENST00000600026		I3L2K1	104 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026		K7EIM0	57 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	S100A11	P31949	105 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	NHLH2	Q02577	135 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	SLC38A11	Q08AI6	406 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	C8orf86	Q6ZUL3	223 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	ACOT7L	Q6ZUV0	252 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	SLC16A13	Q7RTY0	426 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	LILRB2	Q8N423	598 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	TMEM217	Q8N7C4	229 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR1S2	Q8NGQ3	325 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	EEF1AKMT3	Q96AZ1	226 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	SLC35E1	Q96K37	410 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	MFF	Q9GZY8	342 aa		17.01	■□□□□ 0.31
LTBP4-227	ENST00000600026	CMYA5	Q8N3K9	4069 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	IGHV3-21	A0A0B4J1V1	117 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	PRSS46	E5RG02	174 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	DLK1	P80370	383 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	ATP6V1F	Q16864	119 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	GGACT	Q9BVM4	153 aa		17	■□□□□ 0.31
LTBP4-227	ENST00000600026	FNDC4	Q9H6D8	234 aa	Predicted RBP	17	■□□□□ 0.31
LTBP4-227	ENST00000600026	AP2S1	P53680	142 aa	Predicted RBP	16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	MFAP4	P55083	255 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	ARL16	Q0P5N6	197 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR2F1	Q13607	317 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	ACSM6	Q6P461	480 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	HAPLN4	Q86UW8	402 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	SCARB1	Q8WTV0	552 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	C4orf3	Q8WVX3	66 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR5B12	Q96R08	314 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	C21orf62	Q9NYP8	219 aa		16.99	■□□□□ 0.31
LTBP4-227	ENST00000600026	TRBV7-1	A0A0A6YYK4	115 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	RNF222	A6NCQ9	220 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	MFSD2B	A6NFX1	497 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	IGHV3-11	P01762	117 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	MLANA	Q16655	118 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR4F17	Q8NGA8	305 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR5C1	Q8NGR4	320 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR4F4	Q96R69	305 aa		16.98	■□□□□ 0.31
LTBP4-227	ENST00000600026	TRRAP	Q9Y4A5	3859 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	SMCO3	A2RU48	225 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	FNDC10	F2Z333	226 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	NPBWR1	P48145	328 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	EIF2B2	P49770	351 aa	Known RBP	16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	ZNF345	Q14585	488 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	DEFB136	Q30KP8	78 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	FAM209B	Q5JX69	171 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	TXN2	Q99757	166 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026	GAR1	Q9NY12	217 aa	Known RBP	16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026		S4R3C0	116 aa		16.97	■□□□□ 0.31
LTBP4-227	ENST00000600026		A0A0D9SG52	128 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026		I3L521	148 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	SCGB2A1	O75556	95 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	DFFB	O76075	338 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	IGHV3-48	P01763	117 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	LGALS1	P09382	135 aa	Known RBP	16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	AKR1C1	Q04828	323 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026		Q56UQ5	140 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	UBAC2	Q8NBM4	344 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	OR4X1	Q8NH49	305 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	ZNF502	Q8TBZ5	544 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	BSCL2	Q96G97	398 aa	Predicted RBP	16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	ACY3	Q96HD9	319 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	ATP6V0B	Q99437	205 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	TMEM147	Q9BVK8	224 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	SMIM3	Q9BZL3	60 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	UQCC1	Q9NVA1	299 aa		16.96	■□□□□ 0.31
LTBP4-227	ENST00000600026	IGHV3-23	P01764	117 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	RND2	P52198	227 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	RUNX1	Q01196	453 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	GAMT	Q14353	236 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	CLINT1	Q14677	625 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	PRR31	Q5SQ13	230 aa		16.95	■□□□□ 0.3
LTBP4-227	ENST00000600026	TMEM116	Q8NCL8	245 aa		16.95	■□□□□ 0.3

Retrieved 100 of 20,778 RNA–protein pairs in 68 ms