RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 ZNF429Q86V71 674 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 C12orf45Q8N5I9 185 aaPredicted RBP4.97□□□□□ -1.61
VPS4B-205ENST00000591383 LRTM2Q8N967 370 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 SPATA3Q8NHX4 192 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 MITD1Q8WV92 249 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 TMEM68Q96MH6 324 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 SRSF8Q9BRL6 282 aaKnown RBP4.97□□□□□ -1.61
VPS4B-205ENST00000591383 MAGT1Q9H0U3 335 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 ALX4Q9H161 411 aaPredicted RBP4.97□□□□□ -1.61
VPS4B-205ENST00000591383 NDUFA4L2Q9NRX3 87 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.97□□□□□ -1.61
VPS4B-205ENST00000591383 PAIP2BQ9ULR5 123 aaKnown RBP4.97□□□□□ -1.61
VPS4B-205ENST00000591383 TMED3Q9Y3Q3 217 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 S4R3C0 116 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 NBEAL1Q6ZS30 2694 aa4.97□□□□□ -1.61
VPS4B-205ENST00000591383 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.61
VPS4B-205ENST00000591383 IGHV3-21A0A0B4J1V1 117 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 A0A1B0GU03 582 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 C5orf51A6NDU8 294 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 FAM223BA6NKX1 122 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 MPTX1A8MV57 137 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 A8MZ25 164 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 GOSR2O14653 212 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 IL5P05113 134 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 LGALS1P09382 135 aaKnown RBP4.96□□□□□ -1.62
VPS4B-205ENST00000591383 CTRB1P17538 263 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 SNCAP37840 140 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 RAB9AP51151 201 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 S100A10P60903 97 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 SPCS3P61009 180 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 TATDN3Q17R31 274 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 IAH1Q2TAA2 248 aaPredicted RBP4.96□□□□□ -1.62
VPS4B-205ENST00000591383 C15orf32Q32M92 178 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 CTRB2Q6GPI1 263 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 Q6ZNX1 250 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 HSD17B13Q7Z5P4 300 aaPredicted RBP4.96□□□□□ -1.62
VPS4B-205ENST00000591383 FAM223AQ8IWN6 122 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 CADM3Q8N126 398 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 TTC9CQ8N5M4 171 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 DUSP18Q8NEJ0 188 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 SLC24A4Q8NFF2 622 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 OR4F17Q8NGA8 305 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 DTD1Q8TEA8 209 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 C4orf3Q8WVX3 66 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 PINX1Q96BK5 328 aaKnown RBP4.96□□□□□ -1.62
VPS4B-205ENST00000591383 OR4F4Q96R69 305 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 MARVELD1Q9BSK0 173 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 RBKSQ9H477 322 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 SLA2Q9H6Q3 261 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 GSKIPQ9P0R6 139 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 F11RQ9Y624 299 aaKnown RBP4.96□□□□□ -1.62
VPS4B-205ENST00000591383 ALG5Q9Y673 324 aa4.96□□□□□ -1.62
VPS4B-205ENST00000591383 IGLV11-55A0A075B6I3 123 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 A0A0G2JLM5 398 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 MFSD2BA6NFX1 497 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 H3BP45 60 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 IFNA10P01566 189 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 HIST1H1BP16401 226 aaKnown RBP4.95□□□□□ -1.62
VPS4B-205ENST00000591383 NPY1RP25929 384 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 NKX2-1P43699 371 aaPredicted RBP4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ERHP84090 104 aaKnown RBP4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ATP5G2Q06055 141 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ANXA2RQ3ZCQ2 193 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 SERTAD4-AS1Q5TG53 156 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 SLC25A24Q6NUK1 477 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 GSG1LQ6UXU4 331 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ZNF491Q8N8L2 437 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ZBTB8BQ8NAP8 495 aaPredicted RBP4.95□□□□□ -1.62
VPS4B-205ENST00000591383 UBAC2Q8NBM4 344 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 NECAP1Q8NC96 275 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 MYOZ3Q8TDC0 251 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 EEF1AKMT3Q96AZ1 226 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 P2RX4Q99571 388 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 ZFP57Q9NU63 452 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 CACFD1Q9UGQ2 172 aa4.95□□□□□ -1.62
VPS4B-205ENST00000591383 LSM5Q9Y4Y9 91 aaKnown RBP4.95□□□□□ -1.62
VPS4B-205ENST00000591383 NOTCH1P46531 2555 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 IGHV4OR15-8A0A075B7B6 117 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 A0A087WW49 117 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 SNRPGP15A8MWD9 76 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 FAM90A26D6RGX4 464 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 PPP5D1E7EU14 171 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 CCL24O00175 119 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 MED6O75586 246 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 NDUFB8O95169 186 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 SIX6O95475 246 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 TRBV12-3P01733 135 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 IGHV3-48P01763 117 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 CRYGCP07315 174 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 OR8U8P0C7N1 319 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 RNASE2P10153 161 aaKnown RBP4.94□□□□□ -1.62
VPS4B-205ENST00000591383 SLC25A6P12236 298 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 GPR183P32249 361 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 OPRK1P41145 380 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 CDX1P47902 265 aaPredicted RBP4.94□□□□□ -1.62
VPS4B-205ENST00000591383 SUB1P53999 127 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS4B-205ENST00000591383 MFAP2P55001 183 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 POLR2GP62487 172 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS4B-205ENST00000591383 LRRC37A5PQ49AS3 106 aa4.94□□□□□ -1.62
VPS4B-205ENST00000591383 AARDQ4LEZ3 155 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms