RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 OR10J1P30954 320 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 ATP5G3P48201 142 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 GNB1P62873 340 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 GAMTQ14353 236 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 GCSAMLQ5JQS6 135 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 FAM78BQ5VT40 261 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 LINC01551Q86U37 167 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 STXBP6Q8NFX7 210 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 SPATA3Q8NHX4 192 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.03
ZNF540-208ENST00000589857 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 ARID1AO14497 2285 aa8.59□□□□□ -1.03
ZNF540-208ENST00000589857 CHD3Q12873 2000 aaKnown RBP8.58□□□□□ -1.04
ZNF540-208ENST00000589857 A0A1W2PRE2 83 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 A6NNC1 897 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 COX7A2P2O60397 106 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 IGHV2-70P01814 119 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 LINC00869P0C866 280 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 CEACAM3P40198 252 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 PAX2Q02962 417 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 FOXL1Q12952 345 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 COX19Q49B96 90 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-208ENST00000589857 UTF1Q5T230 341 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 ZCCHC24Q8N2G6 241 aaKnown RBP8.58□□□□□ -1.04
ZNF540-208ENST00000589857 NRGNQ92686 78 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 SFRP2Q96HF1 295 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
ZNF540-208ENST00000589857 ABCA4P78363 2273 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 IGHV2-26A0A0B4J1V2 119 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 PPIAL4CA0A0B4J2A2 164 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 TCRBV4S1A1TA0A5B7 111 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 ENSAO43768 121 aaKnown RBP8.57□□□□□ -1.04
ZNF540-208ENST00000589857 OR7C2O60412 319 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 LIPFP07098 398 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 FABP1P07148 127 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 TRGC1P0CF51 173 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 PPIAL4GP0DN37 164 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 RPL27AP46776 148 aaKnown RBP8.57□□□□□ -1.04
ZNF540-208ENST00000589857 PSG5Q15238 335 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 S100A7AQ86SG5 101 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 THAP8Q8NA92 274 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 OR10G8Q8NGN5 311 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 OR1L6Q8NGR2 347 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 RPEQ96AT9 228 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 C1orf159Q96HA4 380 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 DNAJC4Q9NNZ3 241 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 CBLN4Q9NTU7 201 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 BEX4Q9NWD9 120 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-208ENST00000589857 INSIG2Q9Y5U4 225 aa8.57□□□□□ -1.04
ZNF540-208ENST00000589857 A0A1W2PPQ1 181 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 PCP4L1A6NKN8 68 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 M0R1W7 72 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 IGLV2-23P01705 113 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 REG1BP48304 166 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 GNG4P50150 75 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 PRSS8Q16651 343 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 TIGITQ495A1 244 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 LINC01560Q8TB33 94 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 OR51M1Q9H341 326 aa8.56□□□□□ -1.04
ZNF540-208ENST00000589857 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
ZNF540-208ENST00000589857 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
ZNF540-208ENST00000589857 INTS1Q8N201 2190 aaKnown RBP8.55□□□□□ -1.04
ZNF540-208ENST00000589857 TRBV9A0A0B4J1U6 114 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 HELTA6NFD8 242 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 BUB1B-PAK6H3BSN5 160 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 SLC25A17O43808 307 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 IGLV1-47P01700 117 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 NPPCP23582 126 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 TAS2R60P59551 318 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 GTF3C1Q12789 2109 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 COA6Q5JTJ3 125 aaKnown RBP8.55□□□□□ -1.04
ZNF540-208ENST00000589857 ACTL10Q5JWF8 245 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 C10orf113Q5VZT2 155 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 MOB3BQ86TA1 216 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 TMEM183AQ8IXX5 376 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 NECAP1Q8NC96 275 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 OR5T1Q8NG75 326 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 OR1P1Q8NH06 330 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 FRZBQ92765 325 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 PERPQ96FX8 193 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 TRGV9Q99603 122 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 SLC25A33Q9BSK2 321 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 CHRDL1Q9BU40 450 aa8.55□□□□□ -1.04
ZNF540-208ENST00000589857 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms