RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SERTAD4Q9NUC0 356 aa8.83□□□□□ -1
VMP1-207ENST00000588131 WDR83OSQ9Y284 106 aa8.83□□□□□ -1
VMP1-207ENST00000588131 S4R3C0 116 aa8.83□□□□□ -1
VMP1-207ENST00000588131 HIVEP2P31629 2446 aa8.83□□□□□ -1
VMP1-207ENST00000588131 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
VMP1-207ENST00000588131 RPS10-NUDT3A0A1W2PQS6 291 aa8.82□□□□□ -1
VMP1-207ENST00000588131 MFSD2BA6NFX1 497 aa8.82□□□□□ -1
VMP1-207ENST00000588131 FNDC10F2Z333 226 aa8.82□□□□□ -1
VMP1-207ENST00000588131 HIST1H1BP16401 226 aaKnown RBP8.82□□□□□ -1
VMP1-207ENST00000588131 RND2P52198 227 aa8.82□□□□□ -1
VMP1-207ENST00000588131 RHOGP84095 191 aa8.82□□□□□ -1
VMP1-207ENST00000588131 SRSF2Q01130 221 aaKnown RBP8.82□□□□□ -1
VMP1-207ENST00000588131 TEX261Q6UWH6 196 aa8.82□□□□□ -1
VMP1-207ENST00000588131 BTNL8Q6UX41 500 aa8.82□□□□□ -1
VMP1-207ENST00000588131 ALKAL2Q6UX46 152 aa8.82□□□□□ -1
VMP1-207ENST00000588131 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
VMP1-207ENST00000588131 SCARB1Q8WTV0 552 aa8.82□□□□□ -1
VMP1-207ENST00000588131 NPIPB3Q92617 1050 aa8.82□□□□□ -1
VMP1-207ENST00000588131 JMJD8Q96S16 334 aa8.82□□□□□ -1
VMP1-207ENST00000588131 MGST2Q99735 147 aa8.82□□□□□ -1
VMP1-207ENST00000588131 RSG1Q9BU20 258 aa8.82□□□□□ -1
VMP1-207ENST00000588131 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
VMP1-207ENST00000588131 FBXL7Q9UJT9 491 aa8.82□□□□□ -1
VMP1-207ENST00000588131 LSM4Q9Y4Z0 139 aaKnown RBP8.82□□□□□ -1
VMP1-207ENST00000588131 CUBNO60494 3623 aa8.82□□□□□ -1
VMP1-207ENST00000588131 IGKV1OR2-108A0A075B7D4 117 aa8.81□□□□□ -1
VMP1-207ENST00000588131 CYB5BO43169 146 aa8.81□□□□□ -1
VMP1-207ENST00000588131 TCF21O43680 179 aa8.81□□□□□ -1
VMP1-207ENST00000588131 TSPAN9O75954 239 aa8.81□□□□□ -1
VMP1-207ENST00000588131 IGLV1-40P01703 118 aa8.81□□□□□ -1
VMP1-207ENST00000588131 IGHV3-23P01764 117 aa8.81□□□□□ -1
VMP1-207ENST00000588131 TRGV3P03979 118 aa8.81□□□□□ -1
VMP1-207ENST00000588131 EIF5AP63241 154 aaKnown RBP8.81□□□□□ -1
VMP1-207ENST00000588131 ETFRF1Q6IPR1 90 aa8.81□□□□□ -1
VMP1-207ENST00000588131 ACSM6Q6P461 480 aa8.81□□□□□ -1
VMP1-207ENST00000588131 LCNL1Q6ZST4 164 aa8.81□□□□□ -1
VMP1-207ENST00000588131 TMEM144Q7Z5S9 345 aa8.81□□□□□ -1
VMP1-207ENST00000588131 ZNF329Q86UD4 541 aa8.81□□□□□ -1
VMP1-207ENST00000588131 TMED6Q8WW62 240 aa8.81□□□□□ -1
VMP1-207ENST00000588131 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
VMP1-207ENST00000588131 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
VMP1-207ENST00000588131 KLK15Q9H2R5 256 aa8.81□□□□□ -1
VMP1-207ENST00000588131 THYN1Q9P016 225 aa8.81□□□□□ -1
VMP1-207ENST00000588131 FN1P02751 2386 aaKnown RBP8.8□□□□□ -1
VMP1-207ENST00000588131 IGKV1D-37A0A075B6S9 117 aa8.8□□□□□ -1
VMP1-207ENST00000588131 F8W735 103 aaPredicted RBP8.8□□□□□ -1
VMP1-207ENST00000588131 H3BUA1 57 aa8.8□□□□□ -1
VMP1-207ENST00000588131 BRI3O95415 125 aa8.8□□□□□ -1
VMP1-207ENST00000588131 IGHG4P01861 327 aa8.8□□□□□ -1
VMP1-207ENST00000588131 CRYBA1P05813 215 aa8.8□□□□□ -1
VMP1-207ENST00000588131 SPP1P10451 314 aa8.8□□□□□ -1
VMP1-207ENST00000588131 PF4V1P10720 104 aa8.8□□□□□ -1
VMP1-207ENST00000588131 OR10J1P30954 320 aa8.8□□□□□ -1
VMP1-207ENST00000588131 RIPPLY3P57055 190 aa8.8□□□□□ -1
VMP1-207ENST00000588131 TPPP2P59282 170 aa8.8□□□□□ -1
VMP1-207ENST00000588131 RPL15P61313 204 aaKnown RBP8.8□□□□□ -1
VMP1-207ENST00000588131 C15orf32Q32M92 178 aa8.8□□□□□ -1
VMP1-207ENST00000588131 FAM74A1Q5RGS3 127 aa8.8□□□□□ -1
VMP1-207ENST00000588131 TEPPQ6URK8 271 aa8.8□□□□□ -1
VMP1-207ENST00000588131 THAP8Q8NA92 274 aa8.8□□□□□ -1
VMP1-207ENST00000588131 NECAP1Q8NC96 275 aa8.8□□□□□ -1
VMP1-207ENST00000588131 ZNF680Q8NEM1 530 aa8.8□□□□□ -1
VMP1-207ENST00000588131 OR4X1Q8NH49 305 aa8.8□□□□□ -1
VMP1-207ENST00000588131 GGTLC1Q9BX51 225 aa8.8□□□□□ -1
VMP1-207ENST00000588131 MXRA5Q9NR99 2828 aa8.8□□□□□ -1
VMP1-207ENST00000588131 PSMB11A5LHX3 300 aa8.79□□□□□ -1
VMP1-207ENST00000588131 AGPAT2O15120 278 aa8.79□□□□□ -1
VMP1-207ENST00000588131 SEC11BP0C7V7 166 aa8.79□□□□□ -1
VMP1-207ENST00000588131 CAMLGP49069 296 aa8.79□□□□□ -1
VMP1-207ENST00000588131 TMEM182Q6ZP80 229 aaPredicted RBP8.79□□□□□ -1
VMP1-207ENST00000588131 CENPVQ7Z7K6 275 aaPredicted RBP8.79□□□□□ -1
VMP1-207ENST00000588131 TMEM116Q8NCL8 245 aa8.79□□□□□ -1
VMP1-207ENST00000588131 VN1R17PQ8TDU5 208 aa8.79□□□□□ -1
VMP1-207ENST00000588131 GNPNAT1Q96EK6 184 aaPredicted RBP8.79□□□□□ -1
VMP1-207ENST00000588131 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
VMP1-207ENST00000588131 PSMG3Q9BT73 122 aaPredicted RBP8.79□□□□□ -1
VMP1-207ENST00000588131 C16orf95Q9H693 158 aa8.79□□□□□ -1
VMP1-207ENST00000588131 C21orf62Q9NYP8 219 aa8.79□□□□□ -1
VMP1-207ENST00000588131 TIMM9Q9Y5J7 89 aa8.79□□□□□ -1
VMP1-207ENST00000588131 F8P00451 2351 aa8.78□□□□□ -1
VMP1-207ENST00000588131 FAM223BA6NKX1 122 aa8.78□□□□□ -1
VMP1-207ENST00000588131 RGS13O14921 159 aa8.78□□□□□ -1
VMP1-207ENST00000588131 MPDU1O75352 247 aa8.78□□□□□ -1
VMP1-207ENST00000588131 CLN5O75503 358 aa8.78□□□□□ -1
VMP1-207ENST00000588131 IGLC1P0CG04 106 aa8.78□□□□□ -1
VMP1-207ENST00000588131 GATA2P23769 480 aaPredicted RBP8.78□□□□□ -1
VMP1-207ENST00000588131 PSMB8P28062 276 aa8.78□□□□□ -1
VMP1-207ENST00000588131 RAB9AP51151 201 aa8.78□□□□□ -1
VMP1-207ENST00000588131 MFAP4P55083 255 aa8.78□□□□□ -1
VMP1-207ENST00000588131 SLC35B1P78383 322 aa8.78□□□□□ -1
VMP1-207ENST00000588131 ZNF90Q03938 601 aa8.78□□□□□ -1
VMP1-207ENST00000588131 ATP5G2Q06055 141 aa8.78□□□□□ -1
VMP1-207ENST00000588131 Q56UQ5 140 aa8.78□□□□□ -1
VMP1-207ENST00000588131 MIC13Q5XKP0 118 aa8.78□□□□□ -1
VMP1-207ENST00000588131 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
VMP1-207ENST00000588131 OR2G3Q8NGZ4 309 aa8.78□□□□□ -1
VMP1-207ENST00000588131 ZNF502Q8TBZ5 544 aa8.78□□□□□ -1
VMP1-207ENST00000588131 CCDC140Q96MF4 163 aa8.78□□□□□ -1
VMP1-207ENST00000588131 UBQLN2Q9UHD9 624 aa8.78□□□□□ -1
VMP1-207ENST00000588131 SLC45A2Q9UMX9 530 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms