RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SEC14L6B5MCN3 397 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 CRYGCP07315 174 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 FBP1P09467 338 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 ADCYAP1P18509 176 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 PPT1P50897 306 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 TMEM249Q2WGJ8 235 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 C22orf15Q8WYQ4 148 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 GNG13Q9P2W3 67 aa15.72■□□□□ 0.11
TRIM47-204ENST00000587339 MT-CO2P00403 227 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 RND2P52198 227 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 OR1L6Q8NGR2 347 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 SSX3Q99909 188 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 SEC11CQ9BY50 192 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 SMDT1Q9H4I9 107 aa15.71■□□□□ 0.11
TRIM47-204ENST00000587339 MRPL36Q9P0J6 103 aaKnown RBP15.71■□□□□ 0.11
TRIM47-204ENST00000587339 LINC00869P0C866 280 aa15.7■□□□□ 0.1
TRIM47-204ENST00000587339 KRTAP1-3Q8IUG1 177 aa15.7■□□□□ 0.1
TRIM47-204ENST00000587339 PIFOQ8TCI5 191 aa15.7■□□□□ 0.1
TRIM47-204ENST00000587339 ZFP92A6NM28 416 aa15.7■□□□□ 0.1
TRIM47-204ENST00000587339 TMEM116Q8NCL8 245 aa15.7■□□□□ 0.1
TRIM47-204ENST00000587339 RBM14Q96PK6 669 aaKnown RBP15.7■□□□□ 0.1
TRIM47-204ENST00000587339 SOX21Q9Y651 276 aaPredicted RBP15.7■□□□□ 0.1
TRIM47-204ENST00000587339 CSMD1Q96PZ7 3565 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 IGHV3-21A0A0B4J1V1 117 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 NPIPB5A8MRT5 1133 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 TSPAN9O75954 239 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 GATA2P23769 480 aaPredicted RBP15.69■□□□□ 0.1
TRIM47-204ENST00000587339 DEFA5Q01523 94 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 ASPHD1Q5U4P2 390 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 CYP2G1PQ6ZSU1 146 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 TMEM219Q86XT9 240 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 THAP8Q8NA92 274 aa15.69■□□□□ 0.1
TRIM47-204ENST00000587339 ZNF506Q5JVG8 444 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 C10orf91Q5T1B1 145 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 C5orf56Q8N8D9 126 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 HSPB9Q9BQS6 159 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 NBPF19A0A087WUL8 3843 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 TCRBV4S1A1TA0A5B7 111 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 I3L2K1 104 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 KHDC3LQ587J8 217 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 TTC9CQ8N5M4 171 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 SLC35B3Q9H1N7 401 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 SEPSECSQ9HD40 501 aaKnown RBP15.68■□□□□ 0.1
TRIM47-204ENST00000587339 CARHSP1Q9Y2V2 147 aaKnown RBP15.68■□□□□ 0.1
TRIM47-204ENST00000587339 MOB4Q9Y3A3 225 aa15.68■□□□□ 0.1
TRIM47-204ENST00000587339 IGKV1D-37A0A075B6S9 117 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 IFNA1P01562 189 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 BCL2P10415 239 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 EGR2P11161 476 aaPredicted RBP15.67■□□□□ 0.1
TRIM47-204ENST00000587339 RHOBP62745 196 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 ICAM4Q14773 271 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 IQCF2Q8IXL9 164 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 RXFP4Q8TDU9 374 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 TMPRSS5Q9H3S3 457 aa15.67■□□□□ 0.1
TRIM47-204ENST00000587339 LOC102723971A0A1B0GUV8 181 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 BPIFB3P59826 476 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 ZNF90Q03938 601 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 PMS2P11Q13670 270 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 RBMS3Q6XE24 437 aaKnown RBP15.66■□□□□ 0.1
TRIM47-204ENST00000587339 TNFRSF19Q9NS68 423 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 H3BUX3 64 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 HSPB1P04792 205 aaKnown RBP15.66■□□□□ 0.1
TRIM47-204ENST00000587339 SELENOTP62341 195 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 SLC35E3Q7Z769 313 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 SVBPQ8N300 66 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 SGMS2Q8NHU3 365 aa15.66■□□□□ 0.1
TRIM47-204ENST00000587339 SCO1O75880 301 aa15.65■□□□□ 0.1
TRIM47-204ENST00000587339 FAM78BQ5VT40 261 aa15.65■□□□□ 0.1
TRIM47-204ENST00000587339 C19orf24Q9BVV8 132 aa15.65■□□□□ 0.1
TRIM47-204ENST00000587339 ABCA1O95477 2261 aa15.65■□□□□ 0.1
TRIM47-204ENST00000587339 K7EIM0 57 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 ATP6V0E1O15342 81 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 STAG3L2P0CL84 134 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 STAG3L3P0CL85 134 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 GUCA2BQ16661 112 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 TMUB1Q9BVT8 246 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 VAX2Q9UIW0 290 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 CR1P17927 2039 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 IGLV11-55A0A075B6I3 123 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 SH2D7A6NKC9 451 aaPredicted RBP15.64■□□□□ 0.09
TRIM47-204ENST00000587339 PSMB3P49720 205 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 LY6EQ16553 131 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 WFDC11Q8NEX6 87 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 OR5T1Q8NG75 326 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 OR4X1Q8NH49 305 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 FANCD2OSQ96PS1 177 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 TRGV9Q99603 122 aa15.64■□□□□ 0.09
TRIM47-204ENST00000587339 CXorf1O96002 111 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 SRP19P09132 144 aaKnown RBP15.63■□□□□ 0.09
TRIM47-204ENST00000587339 ARL14EPLP0DKL9 152 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 SPATA31B1PQ5VZV4 182 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 CYB5R2Q6BCY4 276 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 NANPQ8TBE9 248 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 MANBALQ9NQG1 85 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 THYN1Q9P016 225 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 PITPNC1Q9UKF7 332 aa15.63■□□□□ 0.09
TRIM47-204ENST00000587339 GCN1Q92616 2671 aaKnown RBP15.63■□□□□ 0.09
TRIM47-204ENST00000587339 AMY1AP04745 511 aa15.62■□□□□ 0.09
TRIM47-204ENST00000587339 TAGLN2P37802 199 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms