RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 RAB31Q13636 194 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 ACSM6Q6P461 480 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 ATP5SQ99766 215 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 ARPC5LQ9BPX5 153 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 NPVFQ9HCQ7 196 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 C21orf62Q9NYP8 219 aa11.5□□□□□ -0.57
CALR-204ENST00000586967 SMCO3A2RU48 225 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 MPDU1O75352 247 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
CALR-204ENST00000586967 PROK1P58294 105 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 AKR1C1Q04828 323 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.49□□□□□ -0.57
CALR-204ENST00000586967 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 OR4X1Q8NH49 305 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 TMEM158Q8WZ71 300 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 UBE2E2Q96LR5 201 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 ARL6Q9H0F7 186 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 DMRT1Q9Y5R6 373 aa11.49□□□□□ -0.57
CALR-204ENST00000586967 K7EIM0 57 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 HAX1O00165 279 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 GNG7O60262 68 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 JTBO76095 146 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 NDUFB8O95169 186 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
CALR-204ENST00000586967 CLINT1Q14677 625 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 VWC2Q2TAL6 325 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 Q56UQ5 140 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 TEPPQ6URK8 271 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 TMEM144Q7Z5S9 345 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 SCGB1C1Q8TD33 95 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 SCARB1Q8WTV0 552 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
CALR-204ENST00000586967 FBXL17Q9UF56 701 aa11.48□□□□□ -0.57
CALR-204ENST00000586967 BCL2L11O43521 198 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 CDX1P47902 265 aaPredicted RBP11.47□□□□□ -0.57
CALR-204ENST00000586967 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 GAMTQ14353 236 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 SPSB3Q6PJ21 355 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 TMUB2Q71RG4 321 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 HAPLN4Q86UW8 402 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 ZNF491Q8N8L2 437 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 WIPF2Q8TF74 440 aaPredicted RBP11.47□□□□□ -0.57
CALR-204ENST00000586967 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
CALR-204ENST00000586967 ACY3Q96HD9 319 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 FNDC4Q9H6D8 234 aaPredicted RBP11.47□□□□□ -0.57
CALR-204ENST00000586967 KCNIP2Q9NS61 270 aa11.47□□□□□ -0.57
CALR-204ENST00000586967 TCRBV4S1A1TA0A5B7 111 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 NUPL2O15504 423 aaKnown RBP11.46□□□□□ -0.57
CALR-204ENST00000586967 CLN5O75503 358 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 RPLP1P05386 114 aaKnown RBP11.46□□□□□ -0.57
CALR-204ENST00000586967 CXCL2P19875 107 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 RND2P52198 227 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 SRSF2Q01130 221 aaKnown RBP11.46□□□□□ -0.57
CALR-204ENST00000586967 LGALSLQ3ZCW2 172 aaPredicted RBP11.46□□□□□ -0.57
CALR-204ENST00000586967 KHDC1LQ5JSQ8 128 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 PRIMA1Q86XR5 153 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 ZNF502Q8TBZ5 544 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 SMIM3Q9BZL3 60 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 KLK15Q9H2R5 256 aa11.46□□□□□ -0.57
CALR-204ENST00000586967 TSSC4Q9Y5U2 329 aaPredicted RBP11.46□□□□□ -0.57
CALR-204ENST00000586967 ZFHX3Q15911 3703 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.45□□□□□ -0.58
CALR-204ENST00000586967 UBE2L5PA0A1B0GUS4 154 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 MFSD2BA6NFX1 497 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 CFDP00746 253 aaPredicted RBP11.45□□□□□ -0.58
CALR-204ENST00000586967 LGALS1P09382 135 aaKnown RBP11.45□□□□□ -0.58
CALR-204ENST00000586967 LURAP1LQ8IV03 231 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 UBAC2Q8NBM4 344 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 NPIPB3Q92617 1050 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.58
CALR-204ENST00000586967 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
CALR-204ENST00000586967 IGHV3-21A0A0B4J1V1 117 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 BOLA2-SMG1P6H3BVE0 249 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 FGF7P21781 194 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 OR10J1P30954 320 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 SELENOTP62341 195 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
CALR-204ENST00000586967 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 EIF5AL1Q6IS14 154 aaKnown RBP11.44□□□□□ -0.58
CALR-204ENST00000586967 C10orf99Q6UWK7 81 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 TREML4Q6UXN2 200 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 SLC51BQ86UW2 128 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 THAP8Q8NA92 274 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 GNPNAT1Q96EK6 184 aaPredicted RBP11.44□□□□□ -0.58
CALR-204ENST00000586967 TRGV9Q99603 122 aa11.44□□□□□ -0.58
CALR-204ENST00000586967 ZNF471Q9BX82 626 aaPredicted RBP11.44□□□□□ -0.58
CALR-204ENST00000586967 PEF1Q9UBV8 284 aaKnown RBP11.44□□□□□ -0.58
CALR-204ENST00000586967 NIPBLQ6KC79 2804 aaeCLIP11.44□□□□□ -0.584e-9■■□□□ 11.8
CALR-204ENST00000586967 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
CALR-204ENST00000586967 CLEC3BP05452 202 aa11.43□□□□□ -0.58
CALR-204ENST00000586967 TPT1P13693 172 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms