RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 FCGR2BP31994 310 aaPredicted RBP12.57□□□□□ -0.4
SS18-226ENST00000585241 GAMTQ14353 236 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 TEX38Q6PEX7 206 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 ZNF329Q86UD4 541 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 OR4F5Q8NH21 305 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 SLC35E1Q96K37 410 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 MRPL36Q9P0J6 103 aaKnown RBP12.57□□□□□ -0.4
SS18-226ENST00000585241 WDR83OSQ9Y284 106 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 LSM4Q9Y4Z0 139 aaKnown RBP12.57□□□□□ -0.4
SS18-226ENST00000585241 NF1P21359 2839 aa12.57□□□□□ -0.4
SS18-226ENST00000585241 JTBO76095 146 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 RPL7L1Q6DKI1 246 aaKnown RBP12.56□□□□□ -0.4
SS18-226ENST00000585241 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 TREML4Q6UXN2 200 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 TMEM144Q7Z5S9 345 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 SLC51BQ86UW2 128 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 OR4X1Q8NH49 305 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 CXorf58Q96LI9 332 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 NPVFQ9HCQ7 196 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 ZNF355PQ9NSJ1 428 aa12.56□□□□□ -0.4
SS18-226ENST00000585241 JMJD1CQ15652 2540 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 MFSD2BA6NFX1 497 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 TRGV3P03979 118 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 PF4V1P10720 104 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 RAB9AP51151 201 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 TPPP2P59282 170 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
SS18-226ENST00000585241 C15orf32Q32M92 178 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 KLHDC1Q8N7A1 406 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 THAP8Q8NA92 274 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 ZNF502Q8TBZ5 544 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 MS4A10Q96PG2 267 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 TXN2Q99757 166 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 WDR61Q9GZS3 305 aaKnown RBP12.55□□□□□ -0.4
SS18-226ENST00000585241 KLK15Q9H2R5 256 aa12.55□□□□□ -0.4
SS18-226ENST00000585241 UBE2L5PA0A1B0GUS4 154 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 CLPSL1A2RUU4 121 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 F8W735 103 aaPredicted RBP12.54□□□□□ -0.4
SS18-226ENST00000585241 MPDU1O75352 247 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 IFNA5P01569 189 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 RND2P52198 227 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 PROK1P58294 105 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
SS18-226ENST00000585241 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
SS18-226ENST00000585241 CENPVQ7Z7K6 275 aaPredicted RBP12.54□□□□□ -0.4
SS18-226ENST00000585241 ZNF471Q9BX82 626 aaPredicted RBP12.54□□□□□ -0.4
SS18-226ENST00000585241 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
SS18-226ENST00000585241 IGKV1OR2-108A0A075B7D4 117 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 IGHV3-21A0A0B4J1V1 117 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 A0A1B0GUS0 222 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 CLN5O75503 358 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 MFAP4P55083 255 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 DEFA5Q01523 94 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 AKR1C1Q04828 323 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 ATP5G2Q06055 141 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 ACSM6Q6P461 480 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 NPIPB3Q92617 1050 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 EEF1AKMT3Q96AZ1 226 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 GINS3Q9BRX5 216 aa12.53□□□□□ -0.4
SS18-226ENST00000585241 IGKV1D-37A0A075B6S9 117 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 SMCO3A2RU48 225 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
SS18-226ENST00000585241 NPBWR1P48145 328 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 TEPPQ6URK8 271 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 BTNL8Q6UX41 500 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 BAP18Q8IXM2 172 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 OR5AU1Q8NGC0 362 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 WFDC12Q8WWY7 111 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 ACY3Q96HD9 319 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 CCDC140Q96MF4 163 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 GAR1Q9NY12 217 aaKnown RBP12.52□□□□□ -0.41
SS18-226ENST00000585241 RNF114Q9Y508 228 aa12.52□□□□□ -0.41
SS18-226ENST00000585241 NIPBLQ6KC79 2804 aaeCLIP12.52□□□□□ -0.41
SS18-226ENST00000585241 FGF7P21781 194 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 FAM209BQ5JX69 171 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 ZNF343Q6P1L6 599 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 LCNL1Q6ZST4 164 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.51□□□□□ -0.41
SS18-226ENST00000585241 ZNF491Q8N8L2 437 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 OR4X2Q8NGF9 303 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 SCGB1C1Q8TD33 95 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 TRGV9Q99603 122 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 MGST2Q99735 147 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 TIMM9Q9Y5J7 89 aa12.51□□□□□ -0.41
SS18-226ENST00000585241 TRAV30A0A087WSZ9 112 aa12.5□□□□□ -0.41
SS18-226ENST00000585241 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms