RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 PLXNB2O15031 1838 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 EFEMP2O95967 443 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 MORN2Q502X0 79 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 SLC25A48Q6ZT89 311 aaKnown RBP10.89□□□□□ -0.67
RNF43-208ENST00000584437 RNF182Q8N6D2 247 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 VSIRQ9H7M9 311 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 FTH1P19P0C7X4 201 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 SRSF4Q08170 494 aaKnown RBP10.89□□□□□ -0.67
RNF43-208ENST00000584437 LY6EQ16553 131 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 SUPT4H1P63272 117 aaKnown RBP10.89□□□□□ -0.67
RNF43-208ENST00000584437 RNF125Q96EQ8 232 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 DEPPQ9NTK1 212 aa10.89□□□□□ -0.67
RNF43-208ENST00000584437 CHTOPQ9Y3Y2 248 aaKnown RBP10.89□□□□□ -0.67
RNF43-208ENST00000584437 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 PDLIM4P50479 330 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 IGLV3-32A0A0A0MS00 114 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 RAMP3O60896 148 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 PYYP10082 97 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 IGKV1D-8A0A087WSZ0 117 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 ZNF837Q96EG3 531 aaPredicted RBP10.88□□□□□ -0.67
RNF43-208ENST00000584437 RGPD3A6NKT7 1758 aaPredicted RBP10.88□□□□□ -0.67
RNF43-208ENST00000584437 A0A087WV48 116 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 DUTP33316 252 aaKnown RBP10.88□□□□□ -0.67
RNF43-208ENST00000584437 CKS1BP61024 79 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 FAM71F2Q6NXP2 309 aa10.88□□□□□ -0.67
RNF43-208ENST00000584437 C11orf68Q9H3H3 251 aaKnown RBP10.88□□□□□ -0.67
RNF43-208ENST00000584437 IGHV3-49A0A0A0MS15 119 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 GAGE2EQ4V326 116 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 GAGE2DQ9UEU5 116 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.87□□□□□ -0.67
RNF43-208ENST00000584437 IGHV3-66A0A0C4DH42 116 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 FAM166AQ6J272 317 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 CACNA1IQ9P0X4 2223 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 IGHV4-39P01824 125 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 UBE2V1Q13404 147 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 S4R3C0 116 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 TRAV21A0A0B4J279 112 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 RNASE4P34096 147 aaKnown RBP10.87□□□□□ -0.67
RNF43-208ENST00000584437 GGTLC1Q9BX51 225 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 HEATR5BQ9P2D3 2071 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 ZFAND6Q6FIF0 208 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
RNF43-208ENST00000584437 MRPL27Q9P0M9 148 aaKnown RBP10.87□□□□□ -0.67
RNF43-208ENST00000584437 OR9G9P0C7N8 305 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 SIGLEC12Q96PQ1 595 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 NBR2O15453 112 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 SLC25A15Q9Y619 301 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 CENPVQ7Z7K6 275 aaPredicted RBP10.86□□□□□ -0.67
RNF43-208ENST00000584437 PGPEP1Q9NXJ5 209 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 CELA3AP09093 270 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 ATXN8Q156A1 80 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 C8orf46Q8TAG6 207 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 IMMP1LQ96LU5 166 aa10.86□□□□□ -0.67
RNF43-208ENST00000584437 SCN8AQ9UQD0 1980 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 FAM201AQ5SY85 155 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 NEU4Q8WWR8 484 aaPredicted RBP10.85□□□□□ -0.67
RNF43-208ENST00000584437 JMJD8Q96S16 334 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 DMRTA2Q96SC8 542 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 ZNF319Q9P2F9 582 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 IGLV3-12A0A075B6K2 115 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 IGHV1-2P23083 117 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 CLEC19AQ6UXS0 136 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 UMODP07911 640 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 SRSF6Q13247 344 aaKnown RBP10.85□□□□□ -0.67
RNF43-208ENST00000584437 NMSQ5H8A3 153 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 LYL1P12980 280 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
RNF43-208ENST00000584437 SHANK3Q9BYB0 1731 aa10.85□□□□□ -0.67
RNF43-208ENST00000584437 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
RNF43-208ENST00000584437 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 COL4A1P02462 1669 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 TMEM14EPQ6UXP3 125 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 TMEM256Q8N2U0 113 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 ZIC4Q8N9L1 334 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 COL11A1P12107 1806 aaPredicted RBP10.84□□□□□ -0.67
RNF43-208ENST00000584437 ZNF236Q9UL36 1845 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 C17orf100A8MU93 164 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 C3orf79P0CE67 100 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 CRYGSP22914 178 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 CFAP161Q6P656 301 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
RNF43-208ENST00000584437 RPRMLQ8N4K4 120 aa10.84□□□□□ -0.67
RNF43-208ENST00000584437 SLC25A20O43772 301 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 LAGE3Q14657 143 aa10.83□□□□□ -0.68
RNF43-208ENST00000584437 SPAG8Q99932 426 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms