RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SERF2P84101 59 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 LY6EQ16553 131 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 TEPPQ6URK8 271 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 Q6YL49 198 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 C19orf35Q6ZS72 473 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 SLC16A13Q7RTY0 426 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 OR1P1Q8NH06 330 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
SRSF1-204ENST00000581979 F11RQ9Y624 299 aaKnown RBP9.92□□□□□ -0.82
SRSF1-204ENST00000581979 CORTO00230 105 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 HOXA3O43365 443 aaPredicted RBP9.91□□□□□ -0.82
SRSF1-204ENST00000581979 DEFA4P12838 97 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 FHITP49789 147 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 RAB31Q13636 194 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 AANATQ16613 207 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 MLANAQ16655 118 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 CENPVQ7Z7K6 275 aaPredicted RBP9.91□□□□□ -0.82
SRSF1-204ENST00000581979 TMEM86BQ8N661 226 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 C5orf56Q8N8D9 126 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 CACNG8Q8WXS5 425 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 HRH4Q9H3N8 390 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 PITPNC1Q9UKF7 332 aa9.91□□□□□ -0.82
SRSF1-204ENST00000581979 A6NDX4 124 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 CTRB1P17538 263 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 MFAP2P55001 183 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 NDPQ00604 133 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 GAMTQ14353 236 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 TMEM41BQ5BJD5 291 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 FFAR4Q5NUL3 377 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 CTRB2Q6GPI1 263 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 ETFRF1Q6IPR1 90 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 DPPA3Q6W0C5 159 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 TMEM144Q7Z5S9 345 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 MGST2Q99735 147 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 HSPB9Q9BQS6 159 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 PLXNB1O43157 2135 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.82
SRSF1-204ENST00000581979 SH2D7A6NKC9 451 aaPredicted RBP9.9□□□□□ -0.83
SRSF1-204ENST00000581979 PVRIGQ6DKI7 326 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 ACSM6Q6P461 480 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 OR1L6Q8NGR2 347 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 OR2T6Q8NHC8 308 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 ACY3Q96HD9 319 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 FNDC4Q9H6D8 234 aaPredicted RBP9.9□□□□□ -0.83
SRSF1-204ENST00000581979 KCNIP2Q9NS61 270 aa9.9□□□□□ -0.83
SRSF1-204ENST00000581979 LSM4Q9Y4Z0 139 aaKnown RBP9.9□□□□□ -0.83
SRSF1-204ENST00000581979 NPIPB5A8MRT5 1133 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 AGPAT2O15120 278 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 TSPAN9O75954 239 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 MBP02144 154 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 CRYGCP07315 174 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 ASPHD1Q5U4P2 390 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 LFNGQ8NES3 379 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 GGTLC1Q9BX51 225 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 RPRMQ9NS64 109 aa9.89□□□□□ -0.83
SRSF1-204ENST00000581979 FAM181BA6NEQ2 426 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 ATP6V0E1O15342 81 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 CYB5BO43169 146 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 SOX15O60248 233 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 TSPAN15O95858 294 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 MT-CO2P00403 227 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 IGHV3-48P01763 117 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 RAB2AP61019 212 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 ACOT6Q3I5F7 207 aaPredicted RBP9.88□□□□□ -0.83
SRSF1-204ENST00000581979 C16orf82Q7Z2V1 217 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 TTC9CQ8N5M4 171 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 MARC2Q969Z3 335 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 PXMP4Q9Y6I8 212 aa9.88□□□□□ -0.83
SRSF1-204ENST00000581979 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 A0A1B0GUS0 222 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 A0A1B0GV50 99 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 MFSD2BA6NFX1 497 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 NUDT19A8MXV4 375 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 M0QZK8 103 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 EGR2P11161 476 aaPredicted RBP9.87□□□□□ -0.83
SRSF1-204ENST00000581979 S100A1P23297 94 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 RPL15P61313 204 aaKnown RBP9.87□□□□□ -0.83
SRSF1-204ENST00000581979 ECSCRQ19T08 205 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 C9orf152Q5JTZ5 239 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 MIC13Q5XKP0 118 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 UNQ5815/PRO19632Q6UWF5 114 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 OR10G4Q8NGN3 311 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 OR10G9Q8NGN4 311 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 OR10G7Q8NGN6 311 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 NPIPB3Q92617 1050 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 DMRT1Q9Y5R6 373 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 BTBD17A6NE02 478 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 NDUFA7O95182 113 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 IGHV4-59P01825 116 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 M6PRP20645 277 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 OR10J1P30954 320 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 RND2P52198 227 aa9.87□□□□□ -0.83
SRSF1-204ENST00000581979 B2MP61769 119 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms