RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 PAX9P55771 341 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 SPINK9Q5DT21 86 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 FAM78BQ5VT40 261 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 TMEM230Q96A57 120 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 NARS2Q96I59 477 aaKnown RBP9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 NRN1Q9NPD7 142 aa9.47□□□□□ -0.89
CSNK1D-213ENST00000580446 MFNGO00587 321 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 SLC22A5O76082 557 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 CALB2P22676 271 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 MAPK3P27361 379 aaPredicted RBP9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 NPBWR1P48145 328 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 ST3GAL4Q11206 333 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 RAB11BQ15907 218 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 TIGITQ495A1 244 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 SCXQ7RTU7 201 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 AIFM2Q9BRQ8 373 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 WDR12Q9GZL7 423 aaKnown RBP9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 AK6Q9Y3D8 172 aaKnown RBP9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 ORC6Q9Y5N6 252 aa9.46□□□□□ -0.9
CSNK1D-213ENST00000580446 TMEM272A0A1B0GTI8 110 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 NPIPB6E9PJ23 425 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 WBP4O75554 376 aaKnown RBP9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 HTN1P15515 57 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 G6PCP35575 357 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 ZNF79Q15937 498 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 C2orf76Q3KRA6 126 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 KCTD21Q4G0X4 260 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 NFE4Q86UQ8 179 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 CLUHP3Q96NS8 147 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 DIMT1Q9UNQ2 313 aaKnown RBP9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 AP4S1Q9Y587 144 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 U3KQE9 123 aa9.45□□□□□ -0.9
CSNK1D-213ENST00000580446 MARCH11A6NNE9 402 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 M0R2Z0 102 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 RBFOX2O43251 390 aaKnown RBP eCLIP9.44□□□□□ -0.98e-8■■■■■ 31.7
CSNK1D-213ENST00000580446 KRASP01116 189 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 HIST1H1DP16402 221 aaKnown RBP9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 ERVK-16P61578 105 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 KIR3DS1Q14943 382 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 MLANAQ16655 118 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 LELP1Q5T871 98 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 FOXI2Q6ZQN5 318 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 PHYHIPQ92561 330 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 TMEM56Q96MV1 263 aa9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 NOP10Q9NPE3 64 aaKnown RBP9.44□□□□□ -0.9
CSNK1D-213ENST00000580446 A0A096LPF7 62 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 SLC17A2O00624 439 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 SSX1Q16384 188 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 HSD17B12Q53GQ0 312 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 Q6ZSA8 131 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 BAP18Q8IXM2 172 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 BPIFB6Q8NFQ5 453 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 OR10R2Q8NGX6 335 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 FAM3DQ96BQ1 224 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 CENPNQ96H22 339 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 IGF2BP2-AS1Q96M15 143 aa9.43□□□□□ -0.9
CSNK1D-213ENST00000580446 LRCOL1A6NCL2 159 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 SNAPC5O75971 98 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■□□□ 13.4
CSNK1D-213ENST00000580446 ELK1P19419 428 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 HOXA1P49639 335 aaPredicted RBP9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 HES5Q5TA89 166 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 AADACL3Q5VUY0 350 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 Q6ZS49 121 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 TMED4Q7Z7H5 227 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 NTN5Q8WTR8 489 aaPredicted RBP9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 PLEKHA2Q9HB19 425 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 SCPEP1Q9HB40 452 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
CSNK1D-213ENST00000580446 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 FXYD4P59646 89 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 TPRA1Q86W33 373 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 Q8N814 137 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 OR13F1Q8NGS4 319 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 LGALS14Q8TCE9 139 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 NUDCD2Q8WVJ2 157 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 SLC5A7Q9GZV3 580 aa9.41□□□□□ -0.9
CSNK1D-213ENST00000580446 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 LPAR6P43657 344 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 CATR1Q13166 79 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 AMTNQ6UX39 209 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 GPR146Q96CH1 333 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 TMEM80Q96HE8 168 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 ABHD1Q96SE0 405 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
CSNK1D-213ENST00000580446 A0A0J9YX75 114 aa9.39□□□□□ -0.91
CSNK1D-213ENST00000580446 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
CSNK1D-213ENST00000580446 GYG2O15488 501 aa9.39□□□□□ -0.91
CSNK1D-213ENST00000580446 RS1O15537 224 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms