RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 LYSMD4Q5XG99 296 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 SPEM1Q8N4L4 309 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 OR1B1Q8NGR6 318 aa11.76□□□□□ -0.53
SMG6-215ENST00000574501 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
SMG6-215ENST00000574501 GNG5P63218 68 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 SLC25A2Q9BXI2 301 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 FZR1Q9UM11 496 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 KLF13Q9Y2Y9 288 aaPredicted RBP11.75□□□□□ -0.53
SMG6-215ENST00000574501 CHTOPQ9Y3Y2 248 aaKnown RBP11.75□□□□□ -0.53
SMG6-215ENST00000574501 A0A1B0GXF2 115 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 CIDEAO60543 219 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
SMG6-215ENST00000574501 BOKQ9UMX3 212 aaPredicted RBP11.75□□□□□ -0.53
SMG6-215ENST00000574501 WDR82Q6UXN9 313 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 LINC00696Q6ZRV3 163 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 PPP1R32Q7Z5V6 425 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 CD177Q8N6Q3 437 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 CT55Q8WUE5 264 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 DUSP23Q9BVJ7 150 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 MAP1LC3CQ9BXW4 147 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 MUC3AQ02505 3323 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 PEX7O00628 323 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 TNFSF15O95150 251 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 NBEAP1P0C6P0 100 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 HIST1H1EP10412 219 aaKnown RBP11.74□□□□□ -0.53
SMG6-215ENST00000574501 REG1BP48304 166 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 HBBP68871 147 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 C1orf185Q5T7R7 199 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 HES3Q5TGS1 186 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 FAM90A1Q86YD7 464 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 OR4S2Q8NH73 311 aa11.74□□□□□ -0.53
SMG6-215ENST00000574501 FOXA2Q9Y261 457 aaPredicted RBP11.74□□□□□ -0.53
SMG6-215ENST00000574501 PRR14LQ5THK1 2151 aa11.73□□□□□ -0.53
SMG6-215ENST00000574501 C2orf91Q6ZV80 131 aa11.73□□□□□ -0.53
SMG6-215ENST00000574501 ZNF329Q86UD4 541 aa11.73□□□□□ -0.53
SMG6-215ENST00000574501 KLF14Q8TD94 323 aaPredicted RBP11.73□□□□□ -0.53
SMG6-215ENST00000574501 NANOS1Q8WY41 292 aaKnown RBP11.73□□□□□ -0.53
SMG6-215ENST00000574501 PGLYRP4Q96LB8 373 aa11.73□□□□□ -0.53
SMG6-215ENST00000574501 IQCF6A8MYZ5 107 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 G3V4G9 280 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 GOSR1O95249 250 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 CSN3P07498 182 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 HTR1DP28221 377 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 ARF6P62330 175 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 PAX2Q02962 417 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 RTL8BQ17RB0 113 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 CHCHD1Q96BP2 118 aaKnown RBP11.72□□□□□ -0.53
SMG6-215ENST00000574501 HLA-DRB1P01911 266 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 SMIM21Q3B7S5 101 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
SMG6-215ENST00000574501 PRR7Q8TB68 274 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 DDB2Q92466 427 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 JMJD8Q96S16 334 aa11.72□□□□□ -0.53
SMG6-215ENST00000574501 TCTAP57738 103 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 MRPL49Q13405 166 aaKnown RBP11.71□□□□□ -0.53
SMG6-215ENST00000574501 ATP5L2Q7Z4Y8 100 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 LHFPL4Q7Z7J7 247 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 TMEM251Q8N6I4 163 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 ASPMQ8IZT6 3477 aa11.71□□□□□ -0.53
SMG6-215ENST00000574501 PLAUP00749 431 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 LOXL3P58215 753 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 SSBP2P81877 361 aaPredicted RBP11.71□□□□□ -0.54
SMG6-215ENST00000574501 TMEM97Q5BJF2 176 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 VWA1Q6PCB0 445 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 C5orf17Q8NAS9 161 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 SAP25Q8TEE9 199 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 GTSF1Q8WW33 167 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 H1FXQ92522 213 aaKnown RBP11.71□□□□□ -0.54
SMG6-215ENST00000574501 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 WDFY4Q6ZS81 3184 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 NCOR1O75376 2440 aa11.71□□□□□ -0.54
SMG6-215ENST00000574501 H3BUT2 72 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 IGHV3-48P01763 117 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 LIPFP07098 398 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 SRFP11831 508 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 PRDX2P32119 198 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 PET117Q6UWS5 81 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 TEX45Q8NA69 505 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 MAFAQ8NHW3 353 aaPredicted RBP11.7□□□□□ -0.54
SMG6-215ENST00000574501 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 MS4A6AQ9H2W1 248 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 COX8AP10176 69 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 OR10W1Q8NGF6 305 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 OR1N2Q8NGR9 330 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 LRRC29Q8WV35 223 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 C19orf24Q9BVV8 132 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 HILPDAQ9Y5L2 63 aa11.7□□□□□ -0.54
SMG6-215ENST00000574501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms