RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 SCRT2Q9NQ03 307 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 SLC39A9Q9NUM3 307 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 MDFICQ9P1T7 246 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 HSPE1-MOB4S4R3N1 261 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 MAPKBP1O60336 1514 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 KDM5CP41229 1560 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 MYH11P35749 1972 aa3.58□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV5-51A0A0C4DH38 117 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 A0A0D9SEW6 157 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 TRBV27A0A0K0K1C4 114 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 EPM2AB3EWF7 344 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 MPC2O95563 127 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 SOD1P00441 154 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 HSPB1P04792 205 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 CD14P08571 375 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF136P52737 540 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 HIST1H4AP62805 103 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 HBBP68871 147 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 DIAPH2-AS1Q14236 149 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 LINC01554Q52M75 96 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 AMTNQ6UX39 209 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 IZUMO2Q6UXV1 221 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 C9orf47Q6ZRZ4 202 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 TMEM256Q8N2U0 113 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 DAND5Q8N907 189 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 C5orf17Q8NAS9 161 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 ZFP62Q8NB50 900 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 PLPP5Q8NEB5 264 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 OR10G2Q8NGC3 310 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 STAG3L4Q8TBR4 150 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 GTSF1Q8WW33 167 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 RNASE6Q93091 150 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 ZC2HC1AQ96GY0 325 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF414Q96IQ9 312 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 CIB3Q96Q77 187 aaPredicted RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 SHANK2-AS3Q9BTD1 123 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 CHCHD7Q9BUK0 85 aa3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 RRBP1Q9P2E9 1410 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-210ENST00000572787 DOCK6Q96HP0 2047 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 SYNJ1O43426 1573 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 KTN1Q86UP2 1357 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 IGLV11-55A0A075B6I3 123 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV3-49A0A0A0MS15 119 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV3-43A0A0B4J1X8 118 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV5-10-1A0A0J9YXX1 117 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 SMIM31A0A1B0GVY4 71 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 CCDC179H3BU77 68 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 BMPR1BO00238 502 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 BPY2O14599 106 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 CXCL1P09341 107 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV1-8P0DP01 117 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 TGFBR1P36897 503 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 DYNLT3P51808 116 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 FOXI2Q6ZQN5 318 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 TTC9CQ8N5M4 171 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 CD177Q8N6Q3 437 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF525Q8N782 197 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 OR5D16Q8NGK9 328 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 OR8D4Q8NGM9 314 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 LCN9Q8WX39 176 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 TSSK6Q9BXA6 273 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 RPP21Q9H633 154 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 XAGE1AQ9HD64 81 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 DICER1Q9UPY3 1922 aaKnown RBP3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 PLXND1Q9Y4D7 1925 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 UBR2Q8IWV8 1755 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 KIAA1551Q9HCM1 1747 aa3.56□□□□□ -1.84
TOPBP1-210ENST00000572787 MAP3K1Q13233 1512 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 MYH7P12883 1935 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 A0A1B0GUV1 79 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 K7ERS5 55 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 HIST1H2BKO60814 126 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 NDUFB2O95178 105 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 C1QAP02745 245 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 HIST1H2BJP06899 126 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 HLA-DRB4P13762 266 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 ARPP19P56211 112 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 LYZP61626 148 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 LGALS9BQ3B8N2 356 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 FAM78AQ5JUQ0 283 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 C6orf52Q5T4I8 152 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 LGALS9CQ6DKI2 356 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 ATOH7Q8N100 152 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 RNF182Q8N6D2 247 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 OR10P1Q8NGE3 313 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 GINS4Q9BRT9 223 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 ZNF835Q9Y2P0 537 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 HLA-DRB4X5D2U9 266 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 CUL7Q14999 1698 aa3.55□□□□□ -1.84
TOPBP1-210ENST00000572787 IGHV3-21A0A0B4J1V1 117 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 IGKV1-9A0A0C4DH69 117 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 UQCRQO14949 82 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 APCSP02743 223 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 TCRAP04437 139 aa3.54□□□□□ -1.84
TOPBP1-210ENST00000572787 SPINK8P0C7L1 97 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms