RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NXPH3O95157 252 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 TMEM50AO95807 157 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 SLC25A6P12236 298 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 BTCP35070 178 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 OPRK1P41145 380 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 TNFRSF9Q07011 255 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 NOXA1Q86UR1 476 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 SLC24A4Q8NFF2 622 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 OR1S1Q8NH92 325 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 C20orf24Q9BUV8 137 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 CCDC32Q9BV29 185 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 FNDC4Q9H6D8 234 aaPredicted RBP10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 MLXQ9UH92 298 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 TMED3Q9Y3Q3 217 aa10.42□□□□□ -0.74
HERPUD1-218ENST00000569569 RPS10-NUDT3A0A1W2PQS6 291 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 C15orf62A8K5M9 175 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 PLA2G10O15496 165 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 PITX3O75364 302 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 FRMD6-AS1P0C7T7 363 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 IGHV4-30-4P0DP06 118 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 MLANAQ16655 118 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 GUCA2BQ16661 112 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 BTNL8Q6UX41 500 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 TMEM61Q8N0U2 210 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 OR4X1Q8NH49 305 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 RNASEH2CQ8TDP1 164 aaKnown RBP10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 DTD1Q8TEA8 209 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 S100ZQ8WXG8 99 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 WDR89Q96FK6 387 aaPredicted RBP10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 ASCL2Q99929 193 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 RBKSQ9H477 322 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 U3KQ87 197 aa10.41□□□□□ -0.74
HERPUD1-218ENST00000569569 IGHV3OR16-8A0A075B7F1 116 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 TRAV25A0A0B4J276 109 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 LYRM1O43325 122 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 CLN5O75503 358 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 YIF1AO95070 293 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 IFNA10P01566 189 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 HOXB5P09067 269 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 OR4E1P0C645 316 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 NPY1RP25929 384 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 CD81P60033 236 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 RBPMS2Q6ZRY4 209 aaKnown RBP10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 ZNF414Q96IQ9 312 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 OR10C1Q96KK4 312 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 NEURL2Q9BR09 285 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 C19orf73Q9NVV2 129 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 SELENOKQ9Y6D0 94 aa10.4□□□□□ -0.74
HERPUD1-218ENST00000569569 TRAV30A0A087WSZ9 112 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 ZNF207O43670 478 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 SCGB2A1O75556 95 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 SLC25A4P12235 298 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 ATP5IP56385 69 aaPredicted RBP10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 DHRS2Q13268 280 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 LAMTOR1Q6IAA8 161 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 ETFRF1Q6IPR1 90 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 C11orf87Q6NUJ2 197 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 ZNF600Q6ZNG1 722 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 LYG2Q86SG7 212 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 SBSPONQ8IVN8 264 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 COQ8AQ8NI60 647 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 TMEM170AQ8WVE7 144 aa10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 MRPL36Q9P0J6 103 aaKnown RBP10.39□□□□□ -0.75
HERPUD1-218ENST00000569569 TRAV14DV4A0A0A6YYC5 116 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 MED6O75586 246 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 CD7P09564 240 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 ANXA7P20073 488 aaKnown RBP10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 C4orf46Q504U0 113 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 TOMM20LQ6UXN7 152 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 TUBA4BQ9H853 241 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 BATF3Q9NR55 127 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 PUS1Q9Y606 427 aaKnown RBP eCLIP10.38□□□□□ -0.75
HERPUD1-218ENST00000569569 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 TSPAN4O14817 238 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 TCRBP04435 133 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 PRSS54Q6PEW0 395 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 SLC16A13Q7RTY0 426 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 TMEM116Q8NCL8 245 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 OR52B4Q8NGK2 314 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 PTTG2Q9NZH5 202 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 U3KQK5 164 aa10.37□□□□□ -0.75
HERPUD1-218ENST00000569569 OR11H12B2RN74 326 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 CHEK1O14757 476 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 ADAP1O75689 374 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 IFNA21P01568 189 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 IFNA4P05014 189 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 CIB3Q96Q77 187 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 SPAG8Q99932 426 aaPredicted RBP10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 C20orf85Q9H1P6 137 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 ZFAND3Q9H8U3 227 aa10.36□□□□□ -0.75
HERPUD1-218ENST00000569569 SYNGR2O43760 224 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms