RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 UBE2MP61081 183 aaKnown RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 TMEM187Q14656 261 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 TRIQKQ629K1 86 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 NOXA1Q86UR1 476 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 LGI3Q8N145 548 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 SLC35G3Q8N808 338 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 SCARB1Q8WTV0 552 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 MARC2Q969Z3 335 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF503Q96F45 646 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 C7orf50Q9BRJ6 194 aaKnown RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 C21orf62Q9NYP8 219 aa6.99□□□□□ -1.29
CAPN3-219ENST00000569136 LSM4Q9Y4Z0 139 aaKnown RBP6.99□□□□□ -1.29
CAPN3-219ENST00000569136 A0A0B4J2A0 478 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF320A2RRD8 509 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 PPP5D1E7EU14 171 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 CORTO00230 105 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 ST8SIA3O43173 380 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 IGHV3-23P01764 117 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 GP9P14770 177 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 SPNP16150 400 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 CCR6P51684 374 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 DEFA5Q01523 94 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 TMEM268Q5VZI3 342 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 LCN12Q6JVE5 192 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 C19orf35Q6ZS72 473 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 GPR146Q96CH1 333 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 SHPKQ9UHJ6 478 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 UFC1Q9Y3C8 167 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 SMAD5-AS1Q9Y6J3 95 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 DNAH3Q8TD57 4116 aa6.98□□□□□ -1.29
CAPN3-219ENST00000569136 PRKDCP78527 4128 aaKnown RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 A0A1B0GU03 582 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 DUXBA0A1W2PPF3 345 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 MFSD2BA6NFX1 497 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 C2orf70A6NJV1 201 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 I3L2K1 104 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 K7EIM0 57 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 NUPL2O15504 423 aaKnown RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 TGOLN2O43493 480 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 SCGB2A1O75556 95 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 HLA-AP01891 365 aaKnown RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 SULT1A3P0DMM9 295 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 SULT1A4P0DMN0 295 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 FOLR2P14207 255 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 GPR183P32249 361 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 HTR2BP41595 481 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 NPBWR1P48145 328 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 HOXA1P49639 335 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 MFAP2P55001 183 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 RELQ04864 619 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 RBMS2Q15434 407 aaKnown RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 BAK1Q16611 211 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 IZUMO4Q1ZYL8 232 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 DEFB114Q30KQ6 69 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 PVRIGQ6DKI7 326 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 DUSP18Q8NEJ0 188 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 TMEM230Q96A57 120 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 PRR25Q96S07 402 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 NEU1Q99519 415 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 B9D2Q9BPU9 175 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 HIPK2Q9H2X6 1198 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 MRPL27Q9P0M9 148 aaKnown RBP6.97□□□□□ -1.29
CAPN3-219ENST00000569136 CACNG5Q9UF02 275 aa6.97□□□□□ -1.29
CAPN3-219ENST00000569136 OR2T8A6NH00 312 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 A8MWP6 167 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 K7EMT4 169 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 NDUFA4O00483 81 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 SFT2D2O95562 160 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 MT-CO2P00403 227 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 CTSGP08311 255 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 C8orf88P0DMB2 117 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 SLC25A6P12236 298 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 CBLN1P23435 193 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 SUPT4H1P63272 117 aaKnown RBP6.96□□□□□ -1.3
CAPN3-219ENST00000569136 Q56UQ5 140 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 NMSQ5H8A3 153 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 TMED4Q7Z7H5 227 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 LRTM2Q8N967 370 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 LHFPL5Q8TAF8 219 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 S100ZQ8WXG8 99 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 HEYLQ9NQ87 328 aaPredicted RBP6.96□□□□□ -1.3
CAPN3-219ENST00000569136 S4R3C0 116 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 U3KQ87 197 aa6.96□□□□□ -1.3
CAPN3-219ENST00000569136 TRAV25A0A0B4J276 109 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 A0A0G2JRQ6 117 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 RPS10-NUDT3A0A1W2PQS6 291 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 CEBPZOSA8MTT3 80 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 A8MZ25 164 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 NDUFB6O95139 128 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 SMCO1Q147U7 214 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 ANKRD55Q3KP44 614 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 ETFRF1Q6IPR1 90 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 LYZL2Q7Z4W2 148 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 GTSCR1Q86UQ5 136 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 CENPSQ8N2Z9 138 aa6.95□□□□□ -1.3
CAPN3-219ENST00000569136 UXS1Q8NBZ7 420 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms