RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 C2orf83Q53S99 150 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 CLEC12AQ5QGZ9 265 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 CEMP1Q6PRD7 247 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 COMMD7Q86VX2 200 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 DYNAPQ8N1N2 210 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 NATD1Q8N6N6 113 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 ZNF645Q8N7E2 425 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 FAM216BQ8N7L0 139 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 GATD1Q8NB37 220 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR4D11Q8NGI4 311 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR4C13Q8NGP0 309 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 OR1S1Q8NH92 325 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 PFN4Q8NHR9 129 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 MUC7Q8TAX7 377 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 CASTOR1Q8WTX7 329 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 TMEM101Q96IK0 257 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 CCDC115Q96NT0 180 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 TIMM17AQ99595 171 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 PITX2Q99697 317 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 HDHD3Q9BSH5 251 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 SLC25A39Q9BZJ4 359 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 SLC25A31Q9H0C2 315 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 MS4A6AQ9H2W1 248 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 CENPHQ9H3R5 247 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 WFDC1Q9HC57 220 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 COMMD9Q9P000 198 aa2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 RPUSD1Q9UJJ7 312 aaKnown RBP2.22□□□□□ -2.05
HMGB1P6-201ENST00000569046 TCRBV4S1A1TA0A5B7 111 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 C5orf58C9J3I9 102 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 F5H5K5 113 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 H3BQF6 201 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 M0R1X1 148 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 PHYHO14832 338 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 RER1O15258 196 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SYNGR1O43759 233 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 ANGPTL7O43827 346 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 KRT75O95678 551 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 ISG15P05161 165 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CDK1P06493 297 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 ATF1P18846 271 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 GABRR1P24046 479 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CD24P25063 80 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 PSMA1P25786 263 aaKnown RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SSTR5P35346 364 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SRP9P49458 86 aaKnown RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SYNJ2BPP57105 145 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 HERVK_113P61574 105 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 NCALDP61601 193 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 IFITM3Q01628 133 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 BAXQ07812 192 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 RSPO1Q2MKA7 263 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SMUG1Q53HV7 270 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 FAM27BQ5VT28 67 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CD200R1LQ6Q8B3 271 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CLEC19AQ6UXS0 136 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 RASSF6Q6ZTQ3 369 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 NDUFA11Q86Y39 141 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SBSPONQ8IVN8 264 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 WFDC9Q8NEX5 89 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR9I1Q8NGQ6 314 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR11L1Q8NGX0 322 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 FXYD5Q96DB9 178 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 C16orf74Q96GX8 76 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CEP19Q96LK0 163 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 LINC01587Q99440 93 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 ZNF649Q9BS31 505 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 TPT1P8Q9HAU6 139 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 CACYBPQ9HB71 228 aaKnown RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 SPANXB1Q9NS25 103 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 PRO0461Q9UI25 63 aa2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 HUWE1Q7Z6Z7 4374 aaKnown RBP2.21□□□□□ -2.06
HMGB1P6-201ENST00000569046 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TRAV8-2A0A0B4J237 113 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 A0A1B0GXF2 115 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 PSPHP1O15172 72 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CCDC22O60826 627 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CA11O75493 328 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC22A5O76082 557 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CNIH1O95406 144 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SOX14O95416 240 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SERPINE1P05121 402 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 BPGMP07738 259 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CST2P09228 141 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 ASAH2BP0C7U1 165 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 C8orf88P0DMB2 117 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 RPL12P30050 165 aaKnown RBP2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 CTRLP40313 264 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 LGALS7P47929 136 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 NAA20P61599 178 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 SLC35A2P78381 396 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TSPAN31Q12999 210 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 OR8G1Q15617 311 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TMEM183BQ1AE95 376 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 LRRC75BQ2VPJ9 315 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 LDLRAD2Q5SZI1 272 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 C10orf128Q5T292 105 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 HACD4Q5VWC8 232 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 HCP5Q6MZN7 132 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 FAM231DQ6ZW35 169 aa2.2□□□□□ -2.06
HMGB1P6-201ENST00000569046 TMEM183AQ8IXX5 376 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms