RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PBOV1Q9GZY1 135 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 ZNF106Q9H2Y7 1883 aaKnown RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 YTHDC2Q9H6S0 1430 aaKnown RBP1.53□□□□□ -2.16
UBR1-205ENST00000564540 RNF122Q9H9V4 155 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 LRTM1Q9HBL6 345 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 NAT8Q9UHE5 227 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 MYH2Q9UKX2 1941 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 GINS2Q9Y248 185 aa1.53□□□□□ -2.16
UBR1-205ENST00000564540 NYNRINQ9P2P1 1898 aaKnown RBP1.52□□□□□ -2.17
UBR1-205ENST00000564540 KIF1BO60333 1816 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 FHAD1B1AJZ9 1412 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 SETD5Q9C0A6 1442 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 A0A0D9SEW6 157 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 A0A0J9YX75 114 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 IRGMA1A4Y4 181 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 RIIAD1A6NNX1 92 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 PSCAO43653 123 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 IGKV1-16P04430 117 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 BPGMP07738 259 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 TPI1P60174 286 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 HIST1H4AP62805 103 aaKnown RBP1.52□□□□□ -2.17
UBR1-205ENST00000564540 SURF2Q15527 256 aaPredicted RBP1.52□□□□□ -2.17
UBR1-205ENST00000564540 RRN3P1Q2M238 152 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 LINC01554Q52M75 96 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 TMEM128Q5BJH2 165 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 KTN1-AS1Q86SY8 53 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 BPIFA4PQ86YQ2 179 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 TMEM35BQ8NCS4 154 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 ST6GALNAC3Q8NDV1 305 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 STAG3L4Q8TBR4 150 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 WFDC5Q8TCV5 224 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 DCANP1Q8TF63 244 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 SLAMF6Q96DU3 332 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 MALSU1Q96EH3 234 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 ADAT3Q96EY9 351 aaPredicted RBP1.52□□□□□ -2.17
UBR1-205ENST00000564540 TMEM70Q9BUB7 260 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 TMEM133Q9H2Q1 129 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 MRPL16Q9NX20 251 aaKnown RBP1.52□□□□□ -2.17
UBR1-205ENST00000564540 TAS2R7Q9NYW3 318 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 PCTPQ9UKL6 214 aa1.52□□□□□ -2.17
UBR1-205ENST00000564540 FMN1Q68DA7 1419 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 TRPM6Q9BX84 2022 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 TRGV5A0A0B4J1U4 118 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 IGKV1-9A0A0C4DH69 117 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 DUXBA0A1W2PPF3 345 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 C1orf196B1AJZ1 125 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 CREBL2O60519 120 aaPredicted RBP1.51□□□□□ -2.17
UBR1-205ENST00000564540 DEFA4P12838 97 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 PSMB8P28062 276 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 RAB4BP61018 213 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 SUPT4H1P63272 117 aaKnown RBP1.51□□□□□ -2.17
UBR1-205ENST00000564540 SCGB2B2Q4G0G5 96 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 SPANXN3Q5MJ09 141 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 LYRM7Q5U5X0 104 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 TOMM20LQ6UXN7 152 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 CLVS1Q8IUQ0 354 aaPredicted RBP1.51□□□□□ -2.17
UBR1-205ENST00000564540 DYNAPQ8N1N2 210 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 NUP35Q8NFH5 326 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 OR51T1Q8NGJ9 327 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 OR8D4Q8NGM9 314 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 DNAJC9Q8WXX5 260 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 CARD19Q96LW7 228 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 EFCAB11Q9BUY7 163 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 TUBA4BQ9H853 241 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 SLC39A9Q9NUM3 307 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 MED11Q9P086 117 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 ERGIC3Q9Y282 383 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 HSPB11Q9Y547 144 aa1.51□□□□□ -2.17
UBR1-205ENST00000564540 PLXND1Q9Y4D7 1925 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 KMT2BQ9UMN6 2715 aaPredicted RBP1.5□□□□□ -2.17
UBR1-205ENST00000564540 ODF3BA8MYP8 253 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 G3V3Q6 166 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 M0R378 163 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 ARPC5O15511 151 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 CYB5BO43169 146 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 CST8O60676 142 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 MSMBP08118 114 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 UCHL1P09936 223 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 S100A4P26447 101 aaKnown RBP1.5□□□□□ -2.17
UBR1-205ENST00000564540 SAMD13Q5VXD3 122 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 MIR17HGQ75NE6 70 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 TCF24Q7RTU0 167 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 LHFPL1Q86WI0 220 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 TMEM86AQ8N2M4 240 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 RPP25LQ8N5L8 163 aaKnown RBP1.5□□□□□ -2.17
UBR1-205ENST00000564540 PFN4Q8NHR9 129 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 GPX7Q96SL4 187 aaPredicted RBP1.5□□□□□ -2.17
UBR1-205ENST00000564540 OR52A1Q9UKL2 312 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 ICE1Q9Y2F5 2266 aa1.5□□□□□ -2.17
UBR1-205ENST00000564540 WDR90Q96KV7 1748 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 TONSLQ96HA7 1378 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 PTPRSQ13332 1948 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 TRAV7A0A075B6U4 112 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 A0A087X0T9 212 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 E7EQ34 232 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 H7C2G1 150 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 SLC22A1O15245 554 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms