RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 SLC25A48Q6ZT89 311 aaKnown RBP10.95□□□□□ -0.66
CLK3-215ENST00000564353 GBGT1Q8N5D6 347 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 OR1L6Q8NGR2 347 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 EAF1Q96JC9 268 aaPredicted RBP10.95□□□□□ -0.66
CLK3-215ENST00000564353 COMMD5Q9GZQ3 224 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 HELTA6NFD8 242 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 FAM90A9PA6NNJ1 464 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 SNURFLB1AK76 121 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 CEACAM4O75871 244 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 GNG4P50150 75 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 PRCDQ00LT1 54 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 ABHD17AQ96GS6 310 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 VPS25Q9BRG1 176 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 MRPL18Q9H0U6 180 aaKnown RBP10.95□□□□□ -0.66
CLK3-215ENST00000564353 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
CLK3-215ENST00000564353 SLC45A2Q9UMX9 530 aa10.95□□□□□ -0.66
CLK3-215ENST00000564353 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 FAM222BQ8WU58 562 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 PRNDQ9UKY0 176 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 hADV38S2A0JD32 116 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 TYMSP04818 313 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 PRR27Q6MZM9 219 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 TMEM108Q6UXF1 575 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 MMD2Q8IY49 270 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 ST6GALNAC3Q8NDV1 305 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 MS4A10Q96PG2 267 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 DSCAML1Q8TD84 2053 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 M0QZK8 103 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 SLC25A17O43808 307 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 SERF1AO75920 110 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 RNASE2P10153 161 aaKnown RBP10.94□□□□□ -0.66
CLK3-215ENST00000564353 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 NPIPB3Q92617 1050 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
CLK3-215ENST00000564353 MOSP00540 346 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 GATA4P43694 442 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 LCN2P80188 198 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 WT1-ASQ06250 92 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 FAM168AQ92567 244 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 ZNF714Q96N38 554 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 GSX1Q9H4S2 264 aaPredicted RBP10.93□□□□□ -0.66
CLK3-215ENST00000564353 FNDC4Q9H6D8 234 aaPredicted RBP10.93□□□□□ -0.66
CLK3-215ENST00000564353 C17orf100A8MU93 164 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 TOX4O94842 621 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 BMI1P35226 326 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 FOXL1Q12952 345 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 CMTM2Q8TAZ6 248 aa10.93□□□□□ -0.66
CLK3-215ENST00000564353 C16orf97H3BN30 126 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 THBDP07204 575 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 OR5G3P0C626 314 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 CNTFRP26992 372 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 CDKN1AP38936 164 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 PDLIM4P50479 330 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 COA6Q5JTJ3 125 aaKnown RBP10.92□□□□□ -0.66
CLK3-215ENST00000564353 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 BAGE2Q86Y30 109 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 FAM57AQ8TBR7 257 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 BLNKQ8WV28 456 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 FLYWCH2Q96CP2 140 aaKnown RBP10.92□□□□□ -0.66
CLK3-215ENST00000564353 SFXN3Q9BWM7 321 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 CTSZQ9UBR2 303 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 H0YJW9 148 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 MT-CO2P00403 227 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 LINC00310P59036 64 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
CLK3-215ENST00000564353 GNG5P63218 68 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 UBE2L3P68036 154 aaKnown RBP10.92□□□□□ -0.66
CLK3-215ENST00000564353 OR5AU1Q8NGC0 362 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 RNASEH2CQ8TDP1 164 aaKnown RBP10.92□□□□□ -0.66
CLK3-215ENST00000564353 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 NAT8BQ9UHF3 227 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 MED13LQ71F56 2210 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 ATRXP46100 2492 aa10.92□□□□□ -0.66
CLK3-215ENST00000564353 NKX6-3A6NJ46 265 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 CRISP2P16562 243 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 ORM2P19652 201 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 TOMM20LQ6UXN7 152 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 C1orf174Q8IYL3 243 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 NUDT11Q96G61 164 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 V9GYV3 84 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 APOA2P02652 100 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 RPEL1Q2QD12 228 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 ADTRPQ96IZ2 230 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 TBX15Q96SF7 602 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 HSPB9Q9BQS6 159 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 ZNF430Q9H8G1 570 aaPredicted RBP10.91□□□□□ -0.66
CLK3-215ENST00000564353 TECRQ9NZ01 308 aaKnown RBP10.91□□□□□ -0.66
CLK3-215ENST00000564353 RNF114Q9Y508 228 aa10.91□□□□□ -0.66
CLK3-215ENST00000564353 PPIAL4EA0A075B759 164 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 C20orf202A1L168 122 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 PPIAL4DF5H284 164 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 PPIAL4FP0DN26 164 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 CD99P14209 185 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 Q6ZWC4 215 aa10.9□□□□□ -0.66
CLK3-215ENST00000564353 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms