RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SRRM5B3KS81 715 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 GGTLC3B5MD39 225 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 HLA-DQA1P01909 254 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 IGKV1-16P04430 117 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 C8orf88P0DMB2 117 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 UBE2G1P62253 170 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 CX3CL1P78423 397 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 TMEM136Q6ZRR5 245 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 C1orf174Q8IYL3 243 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 FAM216BQ8N7L0 139 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 H1FXQ92522 213 aaKnown RBP9.68□□□□□ -0.86
ABCA3-203ENST00000563623 ST6GALNAC6Q969X2 333 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 SNRNP40Q96DI7 357 aaKnown RBP9.68□□□□□ -0.86
ABCA3-203ENST00000563623 TRBV9A0A0B4J1U6 114 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 IGHV3-21A0A0B4J1V1 117 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 AREGP15514 252 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 ORM2P19652 201 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 TNFSF4P23510 183 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 Q0VG73 95 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 SCGB2A2Q13296 93 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 TMEM249Q2WGJ8 235 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 KLHDC1Q8N7A1 406 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 FAM168AQ92567 244 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 C22orf46C9J442 243 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 BMPR1BO00238 502 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 IGKV3-15P01624 115 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 PRB4P10163 310 aaPredicted RBP9.68□□□□□ -0.86
ABCA3-203ENST00000563623 LOXL3P58215 753 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 ERHP84090 104 aaKnown RBP9.68□□□□□ -0.86
ABCA3-203ENST00000563623 SARAFQ96BY9 339 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 C1orf159Q96HA4 380 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 HARBI1Q96MB7 349 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 AP1S3Q96PC3 154 aa9.68□□□□□ -0.86
ABCA3-203ENST00000563623 AMMECR1Q9Y4X0 333 aaPredicted RBP9.68□□□□□ -0.86
ABCA3-203ENST00000563623 ENSAO43768 121 aaKnown RBP9.67□□□□□ -0.86
ABCA3-203ENST00000563623 FDCSPQ8NFU4 85 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 NAV3Q8IVL0 2385 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 PRSS46E5RG02 174 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 REG1AP05451 166 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
ABCA3-203ENST00000563623 RPL8P62917 257 aaKnown RBP9.67□□□□□ -0.86
ABCA3-203ENST00000563623 GNG5P63218 68 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 SPRY4Q9C004 299 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 ARL2-SNX15V9GYD0 113 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 FAM90A9PA6NNJ1 464 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 K7EP13 123 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 SLC25A5P05141 298 aaKnown RBP9.67□□□□□ -0.86
ABCA3-203ENST00000563623 TNFAIP6P98066 277 aaPredicted RBP9.67□□□□□ -0.86
ABCA3-203ENST00000563623 SAMD13Q5VXD3 122 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 NIT1Q86X76 327 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 PAXXQ9BUH6 204 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 SFXN3Q9BWM7 321 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 COX11Q9Y6N1 276 aa9.67□□□□□ -0.86
ABCA3-203ENST00000563623 LOC105371242A0A075B767 164 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TRGV8A0A0C4DH27 118 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 MMP23AO75900 390 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 APOA2P02652 100 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 ZNF137PP52743 207 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 PRR20EP86478 221 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 PRR20CP86479 221 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 PRR20DP86480 221 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 PRR20BP86481 221 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 PRR20AP86496 221 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 C10orf55Q5SWW7 151 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 NPIPB3Q92617 1050 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 ADTRPQ96IZ2 230 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 FOXA2Q9Y261 457 aaPredicted RBP9.66□□□□□ -0.86
ABCA3-203ENST00000563623 IGKV1OR2-108A0A075B7D4 117 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 KBTBD11-OT1A0A1B0GTJ5 212 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TMPRSS3P57727 454 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 SLAQ13239 276 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TRIP6Q15654 476 aaKnown RBP9.66□□□□□ -0.86
ABCA3-203ENST00000563623 MORN5Q5VZ52 161 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TSKUQ8WUA8 353 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TANC2Q9HCD6 1990 aa9.66□□□□□ -0.86
ABCA3-203ENST00000563623 SPTAN1Q13813 2472 aaKnown RBP9.66□□□□□ -0.86
ABCA3-203ENST00000563623 TEX50A0A1B0GTY4 177 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 HYPMO75409 117 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 SAA1P0DJI8 122 aaPredicted RBP9.65□□□□□ -0.86
ABCA3-203ENST00000563623 CCL8P80075 99 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 MSMPQ1L6U9 139 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 SRRM4A7MD48 611 aaKnown RBP9.65□□□□□ -0.86
ABCA3-203ENST00000563623 UPK2O00526 184 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 TNXAQ16473 311 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 C10orf113Q5VZT2 155 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 RNF7Q9UBF6 113 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 TECTAO75443 2155 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 NDUFB8O95169 186 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 PPBPP02775 128 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 CD24P25063 80 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 NEUROG1Q92886 237 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 CLEC7AQ9BXN2 247 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 CHODLQ9H9P2 273 aa9.65□□□□□ -0.86
ABCA3-203ENST00000563623 SLC25A10Q9UBX3 287 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms