RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 FCGR2BP31994 310 aaPredicted RBP10.92□□□□□ -0.66
CLK3-209ENST00000562670 SULT1A2P50226 295 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 HILS1P60008 231 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 RUNX1Q01196 453 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 RAB31Q13636 194 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 C19orf35Q6ZS72 473 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 OR4X1Q8NH49 305 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 ZNF418Q8TF45 676 aaPredicted RBP10.92□□□□□ -0.66
CLK3-209ENST00000562670 SH3BGRL3Q9H299 93 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 ZNF702PQ9H963 129 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 HIVEP1P15822 2718 aa10.92□□□□□ -0.66
CLK3-209ENST00000562670 SMCO3A2RU48 225 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 TMEM89A2RUT3 159 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 FAM223BA6NKX1 122 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 G3V318 75 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 C9orf152Q5JTZ5 239 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 CLLU1Q5K131 121 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 FAM223AQ8IWN6 122 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 ZNF709Q8N972 641 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 NECAP1Q8NC96 275 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 VN1R17PQ8TDU5 208 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 RNF141Q8WVD5 230 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 JMJD8Q96S16 334 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 MGST2Q99735 147 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 RSG1Q9BU20 258 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 GGTLC1Q9BX51 225 aa10.91□□□□□ -0.66
CLK3-209ENST00000562670 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 IGLV1-40P01703 118 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 FAM157CP0CG43 387 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 RPL29P47914 159 aaKnown RBP10.9□□□□□ -0.66
CLK3-209ENST00000562670 CAMLGP49069 296 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 OR5T1Q8NG75 326 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 SAT2Q96F10 170 aaPredicted RBP10.9□□□□□ -0.66
CLK3-209ENST00000562670 CXorf58Q96LI9 332 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 TRGV9Q99603 122 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 TXN2Q99757 166 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 ESM1Q9NQ30 184 aa10.9□□□□□ -0.66
CLK3-209ENST00000562670 NSD1Q96L73 2696 aaPredicted RBP10.9□□□□□ -0.67
CLK3-209ENST00000562670 AGPAT2O15120 278 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 MBP02144 154 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 NMBP08949 121 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 RND2P52198 227 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 RAB14P61106 215 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 SELENOTP62341 195 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 PRR20EP86478 221 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 PRR20CP86479 221 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 PRR20DP86480 221 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 PRR20BP86481 221 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 PRR20AP86496 221 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 Q6ZS46 218 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 ACY3Q96HD9 319 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 MRPL36Q9P0J6 103 aaKnown RBP10.89□□□□□ -0.67
CLK3-209ENST00000562670 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
CLK3-209ENST00000562670 IGKV1D-37A0A075B6S9 117 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 TCRBV4S1A1TA0A5B7 111 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 CLN5O75503 358 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 SCGB2A1O75556 95 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 IGHG4P01861 327 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 PRH1P02810 166 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 NPBWR1P48145 328 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 RHOGP84095 191 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 MLANAQ16655 118 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 AKR1C8PQ5T2L2 129 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 OR2T6Q8NHC8 308 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 NPIPB3Q92617 1050 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 TNFRSF19Q9NS68 423 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 GAR1Q9NY12 217 aaKnown RBP10.88□□□□□ -0.67
CLK3-209ENST00000562670 C21orf62Q9NYP8 219 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 FBXL7Q9UJT9 491 aa10.88□□□□□ -0.67
CLK3-209ENST00000562670 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
CLK3-209ENST00000562670 TRAV30A0A087WSZ9 112 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 OR2J3O76001 311 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 NDUFB8O95169 186 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 TSPAN15O95858 294 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 MFAP4P55083 255 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 TMEM41BQ5BJD5 291 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 FAM209BQ5JX69 171 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 ACSM6Q6P461 480 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
CLK3-209ENST00000562670 CYP2G1PQ6ZSU1 146 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
CLK3-209ENST00000562670 PLA2G2EQ9NZK7 142 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 PXMP4Q9Y6I8 212 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 MTORP42345 2549 aa10.87□□□□□ -0.67
CLK3-209ENST00000562670 TRBV7-1A0A0A6YYK4 115 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 ZFP92A6NM28 416 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 F8W735 103 aaPredicted RBP10.86□□□□□ -0.67
CLK3-209ENST00000562670 CRLF1O75462 422 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 FABP1P07148 127 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 M6PRP20645 277 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 PSMB8P28062 276 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 OR10J1P30954 320 aa10.86□□□□□ -0.67
CLK3-209ENST00000562670 B2MP61769 119 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms