RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 GNRHRP30968 328 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
KATNB1-202ENST00000562542 HOGA1Q86XE5 327 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 CADM3Q8N126 398 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 C15orf53Q8NAA6 179 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 OR4A16Q8NH70 328 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 TPRKBQ9Y3C4 175 aa13.02□□□□□ -0.33
KATNB1-202ENST00000562542 H3BMM0 161 aa13.01□□□□□ -0.33
KATNB1-202ENST00000562542 RGS10O43665 173 aa13.01□□□□□ -0.33
KATNB1-202ENST00000562542 FXYD7P58549 80 aa13.01□□□□□ -0.33
KATNB1-202ENST00000562542 SCGB2A1O75556 95 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 IGKV3-20P01619 116 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 DAD1P61803 113 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 PRCDQ00LT1 54 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 OXA1LQ15070 435 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 GSG1LQ6UXU4 331 aa13□□□□□ -0.33
KATNB1-202ENST00000562542 TRAV18A0A075B6X5 111 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 SNCAP37840 140 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 AP2S1P53680 142 aaPredicted RBP12.99□□□□□ -0.33
KATNB1-202ENST00000562542 SPINK9Q5DT21 86 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
KATNB1-202ENST00000562542 C22orf42Q6IC83 251 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 CMTM1Q8IZ96 169 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 ZNRF2Q8NHG8 242 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
KATNB1-202ENST00000562542 FAM90A26D6RGX4 464 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 H2BFWTQ7Z2G1 175 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 OR5AP2Q8NGF4 316 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 LGALS14Q8TCE9 139 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 RHBDL2Q9NX52 303 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 EHFQ9NZC4 300 aa12.98□□□□□ -0.33
KATNB1-202ENST00000562542 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
KATNB1-202ENST00000562542 NOTOA8MTQ0 251 aa12.97□□□□□ -0.33
KATNB1-202ENST00000562542 HLA-DRB4P13762 266 aa12.97□□□□□ -0.33
KATNB1-202ENST00000562542 KRTAP10-2P60368 255 aa12.97□□□□□ -0.33
KATNB1-202ENST00000562542 HSPE1P61604 102 aaKnown RBP12.97□□□□□ -0.33
KATNB1-202ENST00000562542 HLA-DRB4X5D2U9 266 aa12.97□□□□□ -0.33
KATNB1-202ENST00000562542 LOC102723971A0A1B0GUV8 181 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 TRDV1A0A1B0GX56 115 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 RPS10-NUDT3A0A1W2PQS6 291 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 NUDT3O95989 172 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 HBE1P02100 147 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 C7orf50Q9BRJ6 194 aaKnown RBP12.96□□□□□ -0.33
KATNB1-202ENST00000562542 ZNF2Q9BSG1 426 aaPredicted RBP12.96□□□□□ -0.33
KATNB1-202ENST00000562542 VCXQ9H320 206 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 DUSP21Q9H596 190 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 GOLT1BQ9Y3E0 138 aa12.96□□□□□ -0.33
KATNB1-202ENST00000562542 MEIS3P1A6NDR6 274 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 CLN5O75503 358 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 OPRK1P41145 380 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 CCL18P55774 89 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 C16orf54Q6UWD8 224 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 GLMPQ8WWB7 406 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 NRN1Q9NPD7 142 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 NDUFB11Q9NX14 153 aa12.95□□□□□ -0.34
KATNB1-202ENST00000562542 CORTO00230 105 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 GPR31O00270 319 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
KATNB1-202ENST00000562542 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.34
KATNB1-202ENST00000562542 TIGITQ495A1 244 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 PHLDA2Q53GA4 152 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 PRSS48Q7RTY5 328 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
KATNB1-202ENST00000562542 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
KATNB1-202ENST00000562542 RRP15Q9Y3B9 282 aaKnown RBP12.94□□□□□ -0.34
KATNB1-202ENST00000562542 CBX5P45973 191 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 RFX2P48378 723 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 HOXA1P49639 335 aaPredicted RBP12.93□□□□□ -0.34
KATNB1-202ENST00000562542 RRN3P1Q2M238 152 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 OR4X1Q8NH49 305 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 SEC22AQ96IW7 307 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 SEPSECSQ9HD40 501 aaKnown RBP12.93□□□□□ -0.34
KATNB1-202ENST00000562542 U3KQE9 123 aa12.93□□□□□ -0.34
KATNB1-202ENST00000562542 S100GP29377 79 aa12.92□□□□□ -0.34
KATNB1-202ENST00000562542 NKX2-1P43699 371 aaPredicted RBP12.92□□□□□ -0.34
KATNB1-202ENST00000562542 DEFB1P60022 68 aa12.92□□□□□ -0.34
KATNB1-202ENST00000562542 OR4B1Q8NGF8 309 aa12.92□□□□□ -0.34
KATNB1-202ENST00000562542 MRGPRFQ96AM1 343 aa12.92□□□□□ -0.34
KATNB1-202ENST00000562542 IGKV1-17P01599 117 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 PMP2P02689 132 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 MLANAQ16655 118 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 Q5VSD8 79 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 DHRS11Q6UWP2 260 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 SIGLEC15Q6ZMC9 328 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 Q8WTZ3 238 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 FRZBQ92765 325 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 FXYD6Q9H0Q3 95 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 FNDC4Q9H6D8 234 aaPredicted RBP12.91□□□□□ -0.34
KATNB1-202ENST00000562542 AUNIPQ9H7T9 357 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 LINC00588Q9Y4M8 146 aa12.91□□□□□ -0.34
KATNB1-202ENST00000562542 TRAV30A0A087WSZ9 112 aa12.9□□□□□ -0.34
KATNB1-202ENST00000562542 F5H768 121 aa12.9□□□□□ -0.34
KATNB1-202ENST00000562542 DLK1P80370 383 aa12.9□□□□□ -0.34
KATNB1-202ENST00000562542 CLINT1Q14677 625 aa12.9□□□□□ -0.34
KATNB1-202ENST00000562542 TBCEQ15813 527 aaPredicted RBP12.9□□□□□ -0.34
KATNB1-202ENST00000562542 IZUMO4Q1ZYL8 232 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms