RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 NUBP2Q9Y5Y2 271 aa4.6□□□□□ -1.67
LRRC28-220ENST00000561253 IGHV4-4A0A075B6R2 117 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 NCBP2LA6PVI3 153 aaKnown RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 KBTBD11O94819 623 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 OR2A4O95047 310 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 HPRT1P00492 218 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 CA2P00918 260 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 OR9G9P0C7N8 305 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 PGAM2P15259 253 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 NQO2P16083 231 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 FAUP35544 74 aaKnown RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 LPAR6P43657 344 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 NKX2-1P43699 371 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 CATR1Q13166 79 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM187Q14656 261 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF846Q147U1 533 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 KLK9Q2XQG4 91 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ANKRD55Q3KP44 614 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 C10orf55Q5SWW7 151 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF57Q68EA5 555 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 SLC35E3Q7Z769 313 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ZNF329Q86UD4 541 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 SLC25A42Q86VD7 318 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 STPG2Q8N412 459 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 SPATA3Q8NHX4 192 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ZFAND1Q8TCF1 268 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 BSCL2Q96G97 398 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM56Q96MV1 263 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 OR2A7Q96R45 310 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM222Q9H0R3 208 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 ALX4Q9H161 411 aaPredicted RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 BEX1Q9HBH7 125 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 METTL1Q9UBP6 276 aaKnown RBP4.59□□□□□ -1.67
LRRC28-220ENST00000561253 KLK9Q9UKQ9 250 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 FLVCR2Q9UPI3 526 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 TMEM56-RWDD3S4R434 201 aa4.59□□□□□ -1.67
LRRC28-220ENST00000561253 C3orf85A0A1B0GTC6 90 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 LINC00854A0A1B0GVQ3 168 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 C5orf52A6NGY3 159 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 G3V318 75 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 UPK2O00526 184 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 PRAF2O60831 178 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 B3GALNT1O75752 331 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 BRI3O95415 125 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 IGHG4P01861 327 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 CRYBA1P05813 215 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 OR5AC1P0C628 307 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 RPA2P15927 270 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 PSMB8P28062 276 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 VDAC2P45880 294 aaPredicted RBP4.58□□□□□ -1.68
LRRC28-220ENST00000561253 OR2B8PP59922 312 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 UBE2MP61081 183 aaKnown RBP4.58□□□□□ -1.68
LRRC28-220ENST00000561253 PPP1R1AQ13522 171 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 OPCMLQ14982 345 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 SP6Q3SY56 376 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 VMA21Q3ZAQ7 101 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 TMEM128Q5BJH2 165 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 NMSQ5H8A3 153 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 SELENOHQ8IZQ5 122 aaKnown RBP4.58□□□□□ -1.68
LRRC28-220ENST00000561253 LRTM2Q8N967 370 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 CCDC71LQ8N9Z2 235 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 DUSP18Q8NEJ0 188 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 OR2T6Q8NHC8 308 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 SGMS2Q8NHU3 365 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 TMEM190Q8WZ59 177 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 RASL11BQ9BPW5 248 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 TMEM14BQ9NUH8 114 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 COPZ2Q9P299 210 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 LINC00527Q9UJ94 153 aa4.58□□□□□ -1.68
LRRC28-220ENST00000561253 A0A087WW49 117 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 IGLC7A0M8Q6 106 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 C15orf61A6NNL5 157 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 SFT2D2O95562 160 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 HRASP01112 189 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 KRASP01116 189 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 TCRBP04435 133 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 CD28P10747 220 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 G6PCP35575 357 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 CDX1P47902 265 aaPredicted RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 GNB1P62873 340 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 RPL8P62917 257 aaKnown RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 FXYD3Q14802 87 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 AKIRIN2Q53H80 203 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 SSX9Q7RTT3 188 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 ZNF429Q86V71 674 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 OR4A5Q8NH83 315 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 VSTM2AQ8TAG5 236 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 CHPT1Q8WUD6 406 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 SRSF12Q8WXF0 261 aaKnown RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 ARPC1AQ92747 370 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 RBPMSQ93062 196 aaKnown RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 IL22RA2Q969J5 263 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 SCGB3A2Q96PL1 93 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 CLCC1Q96S66 551 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 FAM103A1Q9BTL3 118 aaKnown RBP4.57□□□□□ -1.68
LRRC28-220ENST00000561253 C20orf85Q9H1P6 137 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 PARP11Q9NR21 331 aa4.57□□□□□ -1.68
LRRC28-220ENST00000561253 NDUFA4L2Q9NRX3 87 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms