RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 SLC25A6P12236 298 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ATP6V0CP27449 155 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 G6PCP35575 357 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 UQCRFS1P47985 274 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CAV2P51636 162 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 CCL8P80075 99 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 RUNX1Q01196 453 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 BSPH1Q075Z2 132 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF816Q0VGE8 651 aaPredicted RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 BTN1A1Q13410 526 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 FAM74A3Q4VXF1 159 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 MORN2Q502X0 79 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 RPL39P5Q59GN2 51 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 C10orf91Q5T1B1 145 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 STUMQ69YW2 141 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 Q6ZRG5 221 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF645Q8N7E2 425 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 FAM216BQ8N7L0 139 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 HSD17B11Q8NBQ5 300 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 STXBP6Q8NFX7 210 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZNF596Q8TC21 504 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 LSM10Q969L4 123 aaKnown RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 SDSLQ96GA7 329 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 TSNAXQ99598 290 aaKnown RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 RBKSQ9H477 322 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 KCNJ16Q9NPI9 418 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 MMP26Q9NRE1 261 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 ZNRD1Q9P1U0 126 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 NUP50Q9UKX7 468 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 RBM7Q9Y580 266 aaKnown RBP3.47□□□□□ -1.85
TMOD3-207ENST00000560549 PRR14LQ5THK1 2151 aa3.47□□□□□ -1.85
TMOD3-207ENST00000560549 BORCS7-ASMTA0A0B4J1R7 106 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 TRAV3A0A0B4J244 114 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 TRGV8A0A0C4DH27 118 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 LOC105371267A0A1B0GV96 52 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 RNASEK-C17orf49H0YIS7 233 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 NUPL2O15504 423 aaKnown RBP3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SYNGR2O43760 224 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CLDN1O95832 211 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 KRASP01116 189 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 TSHBP01222 138 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 APOC3P02656 99 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CD5P06127 495 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CD55P08174 381 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 OR9G9P0C7N8 305 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SEC11BP0C7V7 166 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 M6PRP20645 277 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 EDDM3BP56851 147 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 RIGQ13278 110 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 MSMO1Q15800 293 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 HAGHQ16775 308 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SPINK9Q5DT21 86 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CT45A1Q5HYN5 189 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 NCMAPQ5T1S8 102 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 TEX36Q5VZQ5 186 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 ADAM5Q6NVV9 412 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 LYPD2Q6UXB3 125 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 IL34Q6ZMJ4 242 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 MOB3BQ86TA1 216 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SPAG16Q8N0X2 631 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.46□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF383Q8NA42 475 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF439Q8NDP4 499 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 OR1L6Q8NGR2 347 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 OR5C1Q8NGR4 320 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CT45A3Q8NHU0 189 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 LINC01560Q8TB33 94 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 TCTEX1D2Q8WW35 142 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 DLX4Q92988 240 aaPredicted RBP3.46□□□□□ -1.86
TMOD3-207ENST00000560549 OR4C12Q96R67 309 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SPIN2AQ99865 258 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 SPIN2BQ9BPZ2 258 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 ZNF251Q9BRH9 671 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 IFI27L2Q9H2X8 130 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 GAL3ST2Q9H3Q3 398 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 PARP11Q9NR21 331 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 C19orf12Q9NSK7 152 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 CALYQ9NYX4 217 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 PSENENQ9NZ42 101 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 MMP24Q9Y5R2 645 aa3.46□□□□□ -1.86
TMOD3-207ENST00000560549 ANKHD1Q8IWZ3 2542 aaKnown RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 AKAP9Q99996 3911 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 ICE1Q9Y2F5 2266 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 KBTBD11-OT1A0A1B0GTJ5 212 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 A0A1B0GV50 99 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 PMS2P5A8MQ11 134 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 M0R1X1 148 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 RAB29O14966 203 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 YPEL1O60688 119 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 EIF3GO75821 320 aaKnown RBP eCLIP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 ATG12O94817 140 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 METTL15P1P0C7V9 234 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 PVALBP20472 110 aaPredicted RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 GZMHP20718 246 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 LOXP28300 417 aaPredicted RBP3.45□□□□□ -1.86
TMOD3-207ENST00000560549 S100GP29377 79 aa3.45□□□□□ -1.86
TMOD3-207ENST00000560549 SNCAP37840 140 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms