RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SRSF12Q8WXF0 261 aaKnown RBP4.21□□□□□ -1.74
HERC1-208ENST00000560462 GNPNAT1Q96EK6 184 aaPredicted RBP4.21□□□□□ -1.74
HERC1-208ENST00000560462 RHPN1-AS1Q9BWJ2 59 aa4.21□□□□□ -1.74
HERC1-208ENST00000560462 NEK6Q9HC98 313 aa4.21□□□□□ -1.74
HERC1-208ENST00000560462 SMPXQ9UHP9 88 aa4.21□□□□□ -1.74
HERC1-208ENST00000560462 ORC6Q9Y5N6 252 aa4.21□□□□□ -1.74
HERC1-208ENST00000560462 TRAV9-2A0A087WT02 112 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 DAPL1A0PJW8 107 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 J3QRE1 110 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 K7EMT4 169 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 HBZP02008 142 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 ISG15P05161 165 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 ATF1P18846 271 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 PRKACBP22694 351 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 PPP1CCP36873 323 aaKnown RBP4.2□□□□□ -1.74
HERC1-208ENST00000560462 TAGLN2P37802 199 aaKnown RBP4.2□□□□□ -1.74
HERC1-208ENST00000560462 OR2B8PP59922 312 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 SNRPGP62308 76 aaKnown RBP4.2□□□□□ -1.74
HERC1-208ENST00000560462 TNXAQ16473 311 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 LINC01620Q4KN68 170 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 RPL39P5Q59GN2 51 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 UBE2UQ5VVX9 321 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 MEDAGQ5VYS4 303 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 Q6ZRG5 221 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 FGGYQ96C11 551 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 PELI1Q96FA3 418 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 SPIN2AQ99865 258 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 SPIN2BQ9BPZ2 258 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 ZNF257Q9Y2Q1 563 aa4.2□□□□□ -1.74
HERC1-208ENST00000560462 SNTNA6NMZ2 147 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 OR4C45A6NMZ5 311 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 J3QLW9 94 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 AIPO00170 330 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 RAB29O14966 203 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 SOCS1O15524 211 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 HBE1P02100 147 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 CRYGBP07316 175 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 ZNF19P17023 458 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 RIGQ13278 110 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 P2RY14Q15391 338 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 TTC23Q5W5X9 447 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 ZFP1Q6P2D0 407 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 C9orf47Q6ZRZ4 202 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 C19orf35Q6ZS72 473 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 Q6ZVQ6 151 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 LHFPL3Q86UP9 236 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 TPRA1Q86W33 373 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 SAXO1Q8IYX7 474 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 CMTM1Q8IZ96 169 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 CBR4Q8N4T8 237 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 ACBD7Q8N6N7 88 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 SUMF2Q8NBJ7 301 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 OR4B1Q8NGF8 309 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 RXFP4Q8TDU9 374 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 SCARB1Q8WTV0 552 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 TRUB1Q8WWH5 349 aaKnown RBP4.19□□□□□ -1.74
HERC1-208ENST00000560462 MRPL48Q96GC5 212 aaKnown RBP4.19□□□□□ -1.74
HERC1-208ENST00000560462 IFI27L2Q9H2X8 130 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 ISG20L2Q9H9L3 353 aaKnown RBP4.19□□□□□ -1.74
HERC1-208ENST00000560462 PIPOXQ9P0Z9 390 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 EXOGQ9Y2C4 368 aaKnown RBP4.19□□□□□ -1.74
HERC1-208ENST00000560462 GMPPBQ9Y5P6 360 aa4.19□□□□□ -1.74
HERC1-208ENST00000560462 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
HERC1-208ENST00000560462 IGHV3-49A0A0A0MS15 119 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 TRAV2A0A0B4J234 112 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 IGHV7-4-1A0A0J9YVY3 117 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 FAM240BA0A1B0GVZ2 78 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 MFSD2BA6NFX1 497 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 TMEM212A6NML5 194 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 LYRM9A8MSI8 78 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 NDUFA4O00483 81 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 GABRPO00591 440 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 MT-ND4P03905 459 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 SLPIP03973 132 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 CD5P06127 495 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 KISS1Q15726 138 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 ZSCAN26Q16670 478 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 C6orf183Q5T699 404 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 TCF24Q7RTU0 167 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 PDPNQ86YL7 162 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 LINC00518Q8N0U6 118 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 SYS1Q8N2H4 156 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 OR51A2Q8NGJ7 313 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 OR10G8Q8NGN5 311 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 OR5AK2Q8NH90 309 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 ACOT12Q8WYK0 555 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 GPER1Q99527 375 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 PDCD1LG2Q9BQ51 273 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 C9orf16Q9BUW7 83 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 FAM192AQ9GZU8 254 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 ZNF430Q9H8G1 570 aaPredicted RBP4.18□□□□□ -1.74
HERC1-208ENST00000560462 AMBNQ9NP70 447 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 JPT1Q9UK76 154 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 TRAPPC2LQ9UL33 140 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 ST3GAL6Q9Y274 331 aa4.18□□□□□ -1.74
HERC1-208ENST00000560462 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
HERC1-208ENST00000560462 TRAV26-1A0A087WT03 109 aa4.17□□□□□ -1.74
HERC1-208ENST00000560462 FBLL1A6NHQ2 334 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms