RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 STHQ8IWL8 128 aa9.52□□□□□ -0.89
TPM1-220ENST00000559556 GRAMD2BQ96HH9 432 aa9.52□□□□□ -0.89
TPM1-220ENST00000559556 DYNC1H1Q14204 4646 aaKnown RBP9.52□□□□□ -0.89
TPM1-220ENST00000559556 DNAH11Q96DT5 4516 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 IGHV3-66A0A0C4DH42 116 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 K7EQG2 157 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 CORTO00230 105 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 TMEM50AO95807 157 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 IGKV1-5P01602 117 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 APOA1P02647 267 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 RCVRNP35243 200 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 SNCAP37840 140 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 RND3P61587 244 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 IZUMO4Q1ZYL8 232 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 SPINK9Q5DT21 86 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 RBM38Q9H0Z9 239 aaKnown RBP9.51□□□□□ -0.89
TPM1-220ENST00000559556 RABAC1Q9UI14 185 aa9.51□□□□□ -0.89
TPM1-220ENST00000559556 IGHV4-28A0A0C4DH34 117 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 ZNF705EA8MWA4 302 aaPredicted RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 IGLL5B9A064 214 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 RBMY1A1P0DJD3 496 aaKnown RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 RBMY1CP0DJD4 496 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 SPP1P10451 314 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 MIFP14174 115 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 C4BPBP20851 252 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 CRYBB3P26998 211 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 RBMY1FQ15415 496 aaKnown RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 CTF1Q16619 201 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 MORN3Q6PF18 240 aaPredicted RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 SLC35G3Q8N808 338 aa9.5□□□□□ -0.89
TPM1-220ENST00000559556 ZNF486Q96H40 463 aaPredicted RBP9.5□□□□□ -0.89
TPM1-220ENST00000559556 A0A0B4J293 547 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 A0A1W2PS18 150 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 H3BMQ9 156 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 NPPCP23582 126 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 P2RY1P47900 373 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 AKR1C2P52895 323 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 LSM3P62310 102 aaKnown RBP9.49□□□□□ -0.89
TPM1-220ENST00000559556 LHFPL1Q86WI0 220 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 SNX29P2Q8IUI4 249 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 STXBP6Q8NFX7 210 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 METTL26Q96S19 204 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
TPM1-220ENST00000559556 FNDC4Q9H6D8 234 aaPredicted RBP9.49□□□□□ -0.89
TPM1-220ENST00000559556 MRPL36Q9P0J6 103 aaKnown RBP9.49□□□□□ -0.89
TPM1-220ENST00000559556 M0QYG6 137 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 CLN5O75503 358 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 IFNA17P01571 189 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 ZNF688P0C7X2 276 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM1-220ENST00000559556 PIGPP57054 158 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 VBP1P61758 197 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 Q6ZTC4 211 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 OR4X1Q8NH49 305 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 NAA50Q9GZZ1 169 aaKnown RBP9.48□□□□□ -0.89
TPM1-220ENST00000559556 COMMD3Q9UBI1 195 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 X6R8D5 127 aa9.48□□□□□ -0.89
TPM1-220ENST00000559556 IGHV4-4A0A075B6R2 117 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 ATG12O94817 140 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 PI3P19957 117 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 OPRK1P41145 380 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 HOXA1P49639 335 aaPredicted RBP9.47□□□□□ -0.89
TPM1-220ENST00000559556 PPP5CP53041 499 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 NCS1P62166 190 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 CSNK1G2-AS1Q8NCQ2 148 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 PDCD10Q9BUL8 212 aa9.47□□□□□ -0.89
TPM1-220ENST00000559556 ELOA3CA0A087WX78 387 aaPredicted RBP9.46□□□□□ -0.9
TPM1-220ENST00000559556 AMBPP02760 352 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 PGAM2P15259 253 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 ELK1P19419 428 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 ETV6P41212 452 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 RORCP51449 518 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 AARDQ4LEZ3 155 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 RNASE10Q5GAN6 216 aaKnown RBP9.46□□□□□ -0.9
TPM1-220ENST00000559556 LINC00336Q6ZUF6 198 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 ARRDC1Q8N5I2 433 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 AP3S1Q92572 193 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 NARS2Q96I59 477 aaKnown RBP9.46□□□□□ -0.9
TPM1-220ENST00000559556 RNF126Q9BV68 326 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 TBC1D24Q9ULP9 559 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 U3KQE9 123 aa9.46□□□□□ -0.9
TPM1-220ENST00000559556 TRAV30A0A087WSZ9 112 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 A0A0G2JRQ6 117 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 C3orf85A0A1B0GTC6 90 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 HPGDSO60760 199 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 TBPP20226 339 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 UCP1P25874 307 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
TPM1-220ENST00000559556 SPCS2Q15005 226 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 GLMPQ8WWB7 406 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms