RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 TMEM68Q96MH6 324 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 CITED1Q99966 193 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 MED28Q9H204 178 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 GNB4Q9HAV0 340 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 GSKIPQ9P0R6 139 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 VWFP04275 2813 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 hCG_2014768A0A024R1R8 64 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 IGSF23A1L1A6 192 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 PSMB11A5LHX3 300 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 MFSD2BA6NFX1 497 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 FAM24AA6NFZ4 105 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 WRBO00258 174 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 DEDDO75618 318 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 OR2J3O76001 311 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 ACTL6BO94805 426 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 TRBV12-3P01733 135 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 CRYBA1P05813 215 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 ELANEP08246 267 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 RAB9AP51151 201 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 FOXE3Q13461 319 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 C2orf83Q53S99 150 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 ZNF491Q8N8L2 437 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 C11orf44Q8N8P7 122 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 OR5AU1Q8NGC0 362 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 OR1P1Q8NH06 330 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 RNASE11Q8TAA1 199 aaKnown RBP5.58□□□□□ -1.52
TRAF3-206ENST00000558880 SMIM8Q96KF7 97 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 MS4A10Q96PG2 267 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 CITED2Q99967 270 aaPredicted RBP5.58□□□□□ -1.52
TRAF3-206ENST00000558880 HINT2Q9BX68 163 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 PLEKHA3Q9HB20 300 aa5.58□□□□□ -1.52
TRAF3-206ENST00000558880 RANGRFQ9HD47 186 aaPredicted RBP5.58□□□□□ -1.52
TRAF3-206ENST00000558880 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 IGKV1OR2-108A0A075B7D4 117 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 PIGBOS1A0A0B4J2F0 54 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 RNF222A6NCQ9 220 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 CEBPZOSA8MTT3 80 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 H3BP45 60 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 H3BUA1 57 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 I3L521 148 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 SSSCA1O60232 199 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 SCGB1D2O95969 90 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 IGHV3-48P01763 117 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 HOXA1P49639 335 aaPredicted RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 TAS2R30P59541 319 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 RHOGP84095 191 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 TMEM267Q0VDI3 215 aaPredicted RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 LRRC37A5PQ49AS3 106 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 PRSS54Q6PEW0 395 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 HSD17B13Q7Z5P4 300 aaPredicted RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 TMEM252Q8N6L7 170 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 SLC24A4Q8NFF2 622 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 ABHD5Q8WTS1 349 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 LYRM2Q9NU23 88 aaPredicted RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 MBD2Q9UBB5 411 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 LSM5Q9Y4Y9 91 aaKnown RBP5.57□□□□□ -1.52
TRAF3-206ENST00000558880 S4R3C0 116 aa5.57□□□□□ -1.52
TRAF3-206ENST00000558880 IGKV1D-37A0A075B6S9 117 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 IGHV3-21A0A0B4J1V1 117 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 A0A1B0GUS0 222 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 TSC22D2O75157 780 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 MT-CO2P00403 227 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 SLC25A4P12235 298 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 NPY1RP25929 384 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 HTR2BP41595 481 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 RAP2BP61225 183 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 RPL23AP62750 156 aaKnown RBP5.56□□□□□ -1.52
TRAF3-206ENST00000558880 CD69Q07108 199 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 ZNF343Q6P1L6 599 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 TEX38Q6PEX7 206 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 CENPVQ7Z7K6 275 aaPredicted RBP5.56□□□□□ -1.52
TRAF3-206ENST00000558880 TCTE3Q8IZS6 198 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 ZNF502Q8TBZ5 544 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 SCARB1Q8WTV0 552 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 RAB40CQ96S21 281 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 WFDC1Q9HC57 220 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 HEYLQ9NQ87 328 aaPredicted RBP5.56□□□□□ -1.52
TRAF3-206ENST00000558880 U3KQ87 197 aa5.56□□□□□ -1.52
TRAF3-206ENST00000558880 IGHV3-11P01762 117 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 IGHV3-23P01764 117 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 TRGV3P03979 118 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 METTL15P1P0C7V9 234 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 PF4V1P10720 104 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 FCGR2BP31994 310 aaPredicted RBP5.55□□□□□ -1.52
TRAF3-206ENST00000558880 P2RY1P47900 373 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 CDX1P47902 265 aaPredicted RBP5.55□□□□□ -1.52
TRAF3-206ENST00000558880 S100A10P60903 97 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 ERHP84090 104 aaKnown RBP5.55□□□□□ -1.52
TRAF3-206ENST00000558880 CYCSP99999 105 aaKnown RBP5.55□□□□□ -1.52
TRAF3-206ENST00000558880 RUNX1Q01196 453 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 NHLH2Q02577 135 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 FHL3Q13643 280 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 GAMTQ14353 236 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 C15orf32Q32M92 178 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 CT83Q5H943 113 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 SPANXN5Q5MJ07 72 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 SLC25A24Q6NUK1 477 aa5.55□□□□□ -1.52
TRAF3-206ENST00000558880 TMEM182Q6ZP80 229 aaPredicted RBP5.55□□□□□ -1.52
TRAF3-206ENST00000558880 COMMD1Q8N668 190 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms