RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 C7orf69Q9H7B7 122 aa10.29□□□□□ -0.76
SMAD3-207ENST00000558763 SLC39A9Q9NUM3 307 aa10.29□□□□□ -0.76
SMAD3-207ENST00000558763 CRYGCP07315 174 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 SAA4P35542 130 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CDC34P49427 236 aaPredicted RBP10.28□□□□□ -0.76
SMAD3-207ENST00000558763 B2MP61769 119 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CYB5R2Q6BCY4 276 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 OR2T6Q8NHC8 308 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 RXFP4Q8TDU9 374 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 IGKV1D-37A0A075B6S9 117 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CENPVL3A0A0U1RRI6 287 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 ZFP92A6NM28 416 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 APELAP0DMC3 54 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 GNB1P62873 340 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CYB561D1Q8N8Q1 229 aa10.28□□□□□ -0.76
SMAD3-207ENST00000558763 CYB5BO43169 146 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 ACTL6BO94805 426 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 LGALS4P56470 323 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 CLRN3Q8NCR9 226 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 KCNIP2Q9NS61 270 aa10.27□□□□□ -0.77
SMAD3-207ENST00000558763 IGHV3OR16-10A0A075B7F0 116 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 TRAV40A0A0B4J280 105 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 PSMB11A5LHX3 300 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 SNAPINO95295 136 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 GATA3P23771 443 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 OR10J1P30954 320 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 NDPQ00604 133 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 FAM90A2PQ658T7 463 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 OR1P1Q8NH06 330 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 MALSU1Q96EH3 234 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
SMAD3-207ENST00000558763 F11RQ9Y624 299 aaKnown RBP10.26□□□□□ -0.77
SMAD3-207ENST00000558763 AVPP01185 164 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 IGHV3-48P01763 117 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 STAG3L2P0CL84 134 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 STAG3L3P0CL85 134 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
SMAD3-207ENST00000558763 SUB1P53999 127 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMAD3-207ENST00000558763 CD81P60033 236 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
SMAD3-207ENST00000558763 SRSF8Q9BRL6 282 aaKnown RBP10.26□□□□□ -0.77
SMAD3-207ENST00000558763 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 NPFFO15130 113 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
SMAD3-207ENST00000558763 RAB31Q13636 194 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 HES1Q14469 280 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 PLGLAQ15195 96 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 SOHLH1Q5JUK2 328 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 FAM120AOSQ5T036 256 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 ASPHD1Q5U4P2 390 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 ACY3Q96HD9 319 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 SLC35E1Q96K37 410 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 VAX2Q9UIW0 290 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 CTRB1P17538 263 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 KRTAP1-1Q07627 177 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 CBLN2Q8IUK8 224 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 MRPL41Q8IXM3 137 aaKnown RBP10.25□□□□□ -0.77
SMAD3-207ENST00000558763 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.25□□□□□ -0.77
SMAD3-207ENST00000558763 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 SMR3AQ99954 134 aa10.25□□□□□ -0.77
SMAD3-207ENST00000558763 J3QLI3 93 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 ARL14EPLP0DKL9 152 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 IGHV4-38-2P0DP08 117 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 MEF2BQ02080 365 aaPredicted RBP10.24□□□□□ -0.77
SMAD3-207ENST00000558763 AWAT1Q58HT5 328 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 TMEM88Q6PEY1 159 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 SPNS3Q6ZMD2 512 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
SMAD3-207ENST00000558763 FAM103A1Q9BTL3 118 aaKnown RBP10.24□□□□□ -0.77
SMAD3-207ENST00000558763 RND2P52198 227 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 FXYD3Q14802 87 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 CYP2G1PQ6ZSU1 146 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 Q8N9W7 124 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 TMEM116Q8NCL8 245 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 SUN5Q8TC36 379 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 TMEM37Q8WXS4 190 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 SLC25A33Q9BSK2 321 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 MANBALQ9NQG1 85 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 TMA7Q9Y2S6 64 aaKnown RBP10.23□□□□□ -0.77
SMAD3-207ENST00000558763 TCRBV4S1A1TA0A5B7 111 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 I3L2K1 104 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 IFNA1P01562 189 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 OR5G3P0C626 314 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 TMEM11P17152 192 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 PSMB3P49720 205 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 CX3CL1P78423 397 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 ZNF90Q03938 601 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 ZNF562Q6V9R5 426 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
SMAD3-207ENST00000558763 MXRA5Q9NR99 2828 aa10.22□□□□□ -0.77
SMAD3-207ENST00000558763 IGHV1-69DA0A0B4J2H0 117 aa10.22□□□□□ -0.77
SMAD3-207ENST00000558763 A0A1W2PPV4 95 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms