RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 OXA1LQ15070 435 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 IDNKQ5T6J7 187 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 CROCCP3Q8IVE0 287 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 NUDCD2Q8WVJ2 157 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 SLC25A46Q96AG3 418 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 HINT2Q9BX68 163 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 VCX3AQ9NNX9 186 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 TMEM140Q9NV12 185 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
SMAD3-206ENST00000558739 TEX50A0A1B0GTY4 177 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 A0A1B0GU03 582 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 TEX48A0A1B0GUV7 120 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 H3BMM0 161 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 I3L2K1 104 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 IGKV3-20P01619 116 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 HLA-DQB1P01920 261 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 CD5P06127 495 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 CTXN2P0C2S0 81 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 RPS19P39019 145 aaKnown RBP8.21□□□□□ -1.1
SMAD3-206ENST00000558739 GDF5OSQ5U4N7 250 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 CNIH2Q6PI25 160 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 GSG1LQ6UXU4 331 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 OR13F1Q8NGS4 319 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 HSD17B10Q99714 261 aaKnown RBP8.21□□□□□ -1.1
SMAD3-206ENST00000558739 GINS3Q9BRX5 216 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 ANXA10Q9UJ72 324 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 OR2W1Q9Y3N9 320 aa8.21□□□□□ -1.1
SMAD3-206ENST00000558739 PUS1Q9Y606 427 aaKnown RBP eCLIP8.21□□□□□ -1.1
SMAD3-206ENST00000558739 LOC102723971A0A1B0GUV8 181 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 PRM2P04554 102 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 TRAPPC2P0DI81 140 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 TRAPPC2BP0DI82 140 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 P2RY1P47900 373 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 TTC32Q5I0X7 151 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 MISP3Q96FF7 219 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 FUNDC2Q9BWH2 189 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 AUNIPQ9H7T9 357 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 NDUFA4L2Q9NRX3 87 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 NSG2Q9Y328 171 aa8.2□□□□□ -1.1
SMAD3-206ENST00000558739 TRAV18A0A075B6X5 111 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 HELTA6NFD8 242 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 SULT1C2O00338 296 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 CYB5BO43169 146 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 SMIM18P0DKX4 95 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 PPP5CP53041 499 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 GNG2P59768 71 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 NUTF2P61970 127 aaKnown RBP8.19□□□□□ -1.1
SMAD3-206ENST00000558739 DHRS2Q13268 280 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 USF2Q15853 346 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-206ENST00000558739 TMEM69Q5SWH9 247 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 HOGA1Q86XE5 327 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 SPAG16Q8N0X2 631 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 ZNF709Q8N972 641 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 LSM10Q969L4 123 aaKnown RBP8.19□□□□□ -1.1
SMAD3-206ENST00000558739 DIABLOQ9NR28 239 aa8.19□□□□□ -1.1
SMAD3-206ENST00000558739 SMIM9A6NGZ8 99 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 F5H768 121 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 SLC22A5O76082 557 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 MT-CO2P00403 227 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 MFAP4P55083 255 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 LSM3P62310 102 aaKnown RBP8.18□□□□□ -1.1
SMAD3-206ENST00000558739 C1orf158Q8N1D5 194 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 BEST4Q8NFU0 473 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 ANAPC10Q9UM13 185 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
SMAD3-206ENST00000558739 GNG7O60262 68 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 DEFB130BP0DP73 79 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 DEFB130AP0DP74 79 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 HLA-DRB4P13762 266 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 CBX5P45973 191 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 TAS2R31P59538 309 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 NCS1P62166 190 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 CLINT1Q14677 625 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 MSMO1Q15800 293 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 POU2AF1Q16633 256 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 UBE2NLQ5JXB2 153 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 PINX1Q96BK5 328 aaKnown RBP8.17□□□□□ -1.1
SMAD3-206ENST00000558739 S100A16Q96FQ6 103 aaKnown RBP8.17□□□□□ -1.1
SMAD3-206ENST00000558739 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 HLA-DRB4X5D2U9 266 aa8.17□□□□□ -1.1
SMAD3-206ENST00000558739 FAM90A26D6RGX4 464 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 GABARAPO95166 117 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 IFNA5P01569 189 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 PTHLHP12272 177 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 NQO2P16083 231 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 NAT1P18440 290 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 ERVFC1-1P60608 527 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 VBP1P61758 197 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 FCN2Q15485 313 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 CTF1Q16619 201 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 DMBX1Q8NFW5 382 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 OR1P1Q8NH06 330 aa8.16□□□□□ -1.1
SMAD3-206ENST00000558739 CCL28Q9NRJ3 127 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 493 ms